RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ADPRMQ3LIE5 342 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TMEM69Q5SWH9 247 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 GSG1LQ6UXU4 331 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 SLC30A3Q99726 388 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 SERPINE3A8MV23 424 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 PRAMEF26H0Y7S4 382 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 PTGESO14684 152 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 MSI1O43347 362 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 NDUFS6O75380 124 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ERAL1O75616 437 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 C1orf105O95561 183 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TCRBP04435 133 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 MAXP61244 160 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF546Q86UE3 836 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 BPIFA2Q96DR5 249 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ITGB2P05107 769 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 MAOAP21397 527 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 RPE65Q16518 533 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 UXS1Q8NBZ7 420 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 SLC41A2Q96JW4 573 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 EGLN2Q96KS0 407 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ADAD1Q96M93 576 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 SUSD2Q9UGT4 822 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 EVLQ9UI08 416 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 WASHC1A8K0Z3 465 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 MSX2P35548 267 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 DGKEP52429 567 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 PUS10Q3MIT2 529 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 A0A087WZY1 265 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 HHLA1C9JL84 531 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 CA11O75493 328 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 IFNA5P01569 189 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TGM1P22735 817 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 CSKP41240 450 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TREML2Q5T2D2 321 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 C3orf33Q6P1S2 294 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 C19orf48Q6RUI8 117 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 LSMEM1Q8N8F7 131 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ZCCHC4Q9H5U6 513 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 C19orf53Q9UNZ5 99 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 B3GALT5Q9Y2C3 310 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 C4orf47A7E2U8 309 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 MELTFP08582 738 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ADH5P11766 374 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ARNTP27540 789 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 GLP1RP43220 463 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 HBG1P69891 147 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 HBG2P69892 147 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 RPS19BP1Q86WX3 136 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ARL14Q8N4G2 192 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF485Q8NCK3 441 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 RAB39BQ96DA2 213 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ZFP3Q96NJ6 502 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 INSL5Q9Y5Q6 135 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 LINC00862A6NCI5 91 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 GPR171O14626 319 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 OR1I1O60431 355 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 RAB11BQ15907 218 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 RASGEF1AQ8N9B8 481 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 OR4K1Q8NGD4 311 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 MAL2Q969L2 176 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 DCLRE1CQ96SD1 692 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 POLE4Q9NR33 117 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 LUZP4Q9P127 313 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 GGT3PA6NGU5 568 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 KIAA0040Q15053 153 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ACPTQ9BZG2 426 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 EBF1Q9UH73 591 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 H3BNC9 293 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 HLA-DQA2P01906 255 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 KLK3P07288 261 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 RAB6AP20340 208 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 IL34Q6ZMJ4 242 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 LRRTM3Q86VH5 581 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 WASF3Q9UPY6 502 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 EXOGQ9Y2C4 368 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 MT-CO2P00403 227 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 HNRNPKP61978 463 aaKnown RBP eCLIP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 C17orf67Q0P5P2 114 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ADGRG3Q86Y34 549 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF619Q8N2I2 560 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TP53I13Q8NBR0 393 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 OR6M1Q8NGM8 313 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 OR13C4Q8NGS5 318 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 OR9A4Q8NGU2 314 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TBL1XR1Q9BZK7 514 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 RICTORQ6R327 1708 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 ZNF354AO60765 605 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 NIPSNAP2O75323 286 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 LRRC32Q14392 662 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 IHHQ14623 411 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 SAXO2Q658L1 398 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 OR51D1Q8NGF3 324 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 GMPPAQ96IJ6 420 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 CMSS1Q9BQ75 279 aaKnown RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TXNDC17Q9BRA2 123 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TIMM13Q9Y5L4 95 aaPredicted RBP4.63□□□□□ -1.67
PCDH9-201ENST00000377861 TCRBV5S2A0A599 114 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 VSTM2BA6NLU5 285 aa4.63□□□□□ -1.67
PCDH9-201ENST00000377861 GALR3O60755 368 aaPredicted RBP4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms