RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CARM1Q86X55 608 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 ZSWIM9Q86XI8 627 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 ZFP41Q8N8Y5 198 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 PSD4Q8NDX1 1056 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 OR13H1Q8NG92 308 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 NSMAFQ92636 917 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 GATA6Q92908 595 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 KCMF1Q9P0J7 381 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 NDRG3Q9UGV2 375 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 COL5A3P25940 1745 aaPredicted RBP10.17□□□□□ -0.78
HIF3A-205ENST00000377670 TVP23AA6NH52 213 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 EEDO75530 441 aaKnown RBP10.17□□□□□ -0.78
HIF3A-205ENST00000377670 HK3P52790 923 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 CTSCP53634 463 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 HERV-K104P61576 105 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 FGFBP1Q14512 234 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 TAZQ16635 292 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 ATG9BQ674R7 924 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 KCTD18Q6PI47 426 aaPredicted RBP10.17□□□□□ -0.78
HIF3A-205ENST00000377670 SLC6A7Q99884 636 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 FOLH1BQ9HBA9 442 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 NDUFAF4Q9P032 175 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 CLEC4EQ9ULY5 219 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 SRPX2O60687 465 aaPredicted RBP10.17□□□□□ -0.78
HIF3A-205ENST00000377670 GABRB3P28472 473 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 SPHARQ15513 63 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 KHDC1LQ5JSQ8 128 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 NKAPLQ5M9Q1 402 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 DCDC5Q6ZRR9 648 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 SSX6Q7RTT6 188 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 MRPL21Q7Z2W9 205 aaKnown RBP10.17□□□□□ -0.78
HIF3A-205ENST00000377670 C19orf47Q8N9M1 422 aaKnown RBP10.17□□□□□ -0.78
HIF3A-205ENST00000377670 OR1J4Q8NGS1 313 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 OR9A4Q8NGU2 314 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 OR11L1Q8NGX0 322 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 RHBDF1Q96CC6 855 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 SECISBP2Q96T21 854 aaKnown RBP10.17□□□□□ -0.78
HIF3A-205ENST00000377670 DNTTIP1Q9H147 329 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 DECR2Q9NUI1 292 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 NUFIP1Q9UHK0 495 aaKnown RBP10.17□□□□□ -0.78
HIF3A-205ENST00000377670 NAALAD2Q9Y3Q0 740 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 CSO75390 466 aaKnown RBP10.17□□□□□ -0.78
HIF3A-205ENST00000377670 RBBP9O75884 186 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 TLE3Q04726 772 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 TRAM2Q15035 370 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 LRIT3Q3SXY7 679 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 MANEALQ5VSG8 457 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 LHX8Q68G74 356 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 SFRP4Q6FHJ7 346 aaPredicted RBP10.17□□□□□ -0.78
HIF3A-205ENST00000377670 C6orf106Q9H6K1 298 aaPredicted RBP10.17□□□□□ -0.78
HIF3A-205ENST00000377670 PCTPQ9UKL6 214 aa10.17□□□□□ -0.78
HIF3A-205ENST00000377670 CCDC187A0A096LP49 1063 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 BLACEA4D250 179 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 MITFO75030 526 aaPredicted RBP10.16□□□□□ -0.78
HIF3A-205ENST00000377670 SNNO75324 88 aaPredicted RBP10.16□□□□□ -0.78
HIF3A-205ENST00000377670 RAD51DO75771 328 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 IL9P15248 144 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 S1PR1P21453 382 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 TIA1P31483 386 aaKnown RBP eCLIP10.16□□□□□ -0.78
HIF3A-205ENST00000377670 REEP3Q6NUK4 255 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 FAM198BQ6UWH4 519 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 COMTD1Q86VU5 262 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 HUS1BQ8NHY5 278 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 RAB39BQ96DA2 213 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 PIP5K1AQ99755 562 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 CWH43Q9H720 699 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 KCNIP3Q9Y2W7 256 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 A0A096LPI6 279 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 ATXN1LP0C7T5 689 aaKnown RBP10.16□□□□□ -0.78
HIF3A-205ENST00000377670 GKN3PP0CG01 181 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 CDKN2CP42773 168 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 SNU13P55769 128 aaKnown RBP10.16□□□□□ -0.78
HIF3A-205ENST00000377670 SNTB2Q13425 540 aaKnown RBP10.16□□□□□ -0.78
HIF3A-205ENST00000377670 GTDC1Q4AE62 458 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 AGAP7PQ5VUJ5 663 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 UGT2A3Q6UWM9 527 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 ADIPOR2Q86V24 386 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 CLECL1Q8IZS7 167 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 TANKQ92844 425 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 TMEM41AQ96HV5 264 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 AGAP4Q96P64 663 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 ANKRD60Q9BZ19 345 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 TREX1Q9NSU2 369 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 PPP1R14DQ9NXH3 145 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 CEPT1Q9Y6K0 416 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 ARID1BQ8NFD5 2236 aaPredicted RBP10.16□□□□□ -0.78
HIF3A-205ENST00000377670 PTPRZ1P23471 2315 aaPredicted RBP10.16□□□□□ -0.78
HIF3A-205ENST00000377670 PET100P0DJ07 73 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 HSD3B1P14060 373 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 HSD3B2P26439 372 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 MC3RP41968 323 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 ELP2Q6IA86 826 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 CYS1Q717R9 158 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 BEST3Q8N1M1 668 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 KDM1BQ8NB78 822 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 HCAR1Q9BXC0 346 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 CLEC1BQ9P126 229 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 MBTPS2O43462 519 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 CACNG3O60359 315 aa10.16□□□□□ -0.78
HIF3A-205ENST00000377670 BCAS1O75363 584 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms