RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 NXF5Q9H1B4 397 aaKnown RBP7.87□□□□□ -1.15
CRNKL1-202ENST00000377340 DDX31Q9H8H2 851 aaKnown RBP7.87□□□□□ -1.15
CRNKL1-202ENST00000377340 PLAC1Q9HBJ0 212 aa7.87□□□□□ -1.15
CRNKL1-202ENST00000377340 SLCO1B1Q9Y6L6 691 aa7.87□□□□□ -1.15
CRNKL1-202ENST00000377340 DOCK9Q9BZ29 2069 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 GALR2O43603 387 aaPredicted RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 HYAL3O43820 417 aaPredicted RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 OR2T1O43869 369 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 SNAP29O95721 258 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 SBK3P0C264 359 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 PDX1P52945 283 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 TMEM236Q5W0B7 351 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 APLFQ8IW19 511 aaPredicted RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 RNASE11Q8TAA1 199 aaKnown RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 FBXL20Q96IG2 436 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 SAMD8Q96LT4 415 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 ZPBPQ9BS86 351 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 PIGUQ9H490 435 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 NKX1-2Q9UD57 310 aaPredicted RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 LOC100130705A0A1B0GUX0 176 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 BLACEA4D250 179 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 A6NLC8 198 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 ITGA10O75578 1167 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 PLATP00750 562 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 HOXC4P09017 264 aaPredicted RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 IL12AP29459 219 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 BSGP35613 385 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 OMPP47874 163 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 SOX2P48431 317 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 POU3F1Q03052 451 aaPredicted RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 C17orf67Q0P5P2 114 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 NDUFAF6Q330K2 333 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 KLHL22Q53GT1 634 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 SPANXN2Q5MJ10 180 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 GALNTL5Q7Z4T8 443 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 FAM86B1Q8N7N1 296 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 BOLLQ8N9W6 283 aaKnown RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 C19orf18Q8NEA5 215 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 B3GNT7Q8NFL0 401 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 TMEM239Q8WW34 195 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 CCDC115Q96NT0 180 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 OR2A5Q96R48 311 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 NT5DC2Q9H857 520 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 CALHM2Q9HA72 323 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 NMNAT1Q9HAN9 279 aaPredicted RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 BATF3Q9NR55 127 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 AGPAT4Q9NRZ5 378 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 PPT2Q9UMR5 302 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 CREBBPQ92793 2442 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 TRGV8A0A0C4DH27 118 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 ARNTLO00327 626 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 FAAHO00519 579 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 FCMRO60667 390 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 ZNF20P17024 532 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 CD22P20273 847 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 PIGAP37287 484 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 TSFMP43897 325 aaKnown RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 SLC6A8P48029 635 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 ERVK-25P63136 954 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 TRA2AQ13595 282 aaKnown RBP eCLIP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 MEP1AQ16819 746 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 ARMC4Q5T2S8 1044 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 YOD1Q5VVQ6 348 aaPredicted RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 SLC6A19Q695T7 634 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 LHFPL3Q86UP9 236 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 MARCH9Q86YJ5 346 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 CNRIP1Q96F85 164 aaPredicted RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 VN1R1Q9GZP7 353 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 ABCB9Q9NP78 766 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 MED16Q9Y2X0 877 aa7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 PCYT1BQ9Y5K3 369 aaPredicted RBP7.86□□□□□ -1.15
CRNKL1-202ENST00000377340 TRAV27A0A087WT01 109 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 IGHV5-10-1A0A0J9YXX1 117 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 IRGMA1A4Y4 181 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 SERINC4A6NH21 518 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 PPP1R3DO95685 299 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 WDPCPO95876 746 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 GGT2P36268 569 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 GBX2P52951 348 aaPredicted RBP7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 CDH15P55291 814 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 DEFA1P59665 94 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 DEFA3P59666 94 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 PPP2R2BQ00005 443 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 ISXQ2M1V0 245 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 GAB4Q2WGN9 574 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 ZNF385BQ569K4 471 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 ALG10Q5BKT4 473 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 COQ5Q5HYK3 327 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 SWT1Q5T5J6 900 aaKnown RBP7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 LEG1Q6P5S2 330 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 FUNDC1Q8IVP5 155 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 WDR20Q8TBZ3 569 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 C19orf43Q9BQ61 176 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 CXorf21Q9HAI6 301 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 MED13LQ71F56 2210 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 RBBP6Q7Z6E9 1792 aaKnown RBP7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 J3KTA2 159 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 FBP2O00757 339 aa7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 MITFO75030 526 aaPredicted RBP7.85□□□□□ -1.15
CRNKL1-202ENST00000377340 SOD1P00441 154 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms