RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 ESPNLQ6ZVH7 1005 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 MTERF4Q7Z6M4 381 aaKnown RBP12.75□□□□□ -0.37
NELFE-201ENST00000375425 RIMKLAQ8IXN7 391 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 LILRA2Q8N149 483 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 WFDC11Q8NEX6 87 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 OR56A1Q8NGH5 318 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 OR2V1Q8NHB1 315 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 PHOSPHO1Q8TCT1 267 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 OSTF1Q92882 214 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 CAVIN3Q969G5 261 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 PIK3IP1Q96FE7 263 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 ZC3HAV1LQ96H79 300 aaKnown RBP12.75□□□□□ -0.37
NELFE-201ENST00000375425 GMPPAQ96IJ6 420 aaPredicted RBP12.75□□□□□ -0.37
NELFE-201ENST00000375425 DUSP26Q9BV47 211 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 KLHL4Q9C0H6 718 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 BHLHE41Q9C0J9 482 aaPredicted RBP12.75□□□□□ -0.37
NELFE-201ENST00000375425 NEUROD4Q9HD90 331 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 DLL4Q9NR61 685 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 EMC9Q9Y3B6 208 aa12.75□□□□□ -0.37
NELFE-201ENST00000375425 UQCRHLA0A096LP55 91 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 NPIPA5A0A0B4J1W7 369 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 WDR91A4D1P6 747 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 NPIPA7E9PJI5 369 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 ITM2AO43736 263 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 SYNGR4O95473 234 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 NPIPA8P0DM63 369 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 EIF1P41567 113 aaKnown RBP12.74□□□□□ -0.37
NELFE-201ENST00000375425 RNF144AP50876 292 aaPredicted RBP12.74□□□□□ -0.37
NELFE-201ENST00000375425 CTBP2P56545 445 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 CARD18P57730 90 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 ZNF117Q03924 483 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 EMX2Q04743 252 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 PGS1Q32NB8 556 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 DCST2Q5T1A1 773 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 HBMQ6B0K9 141 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 ZNF527Q8NB42 609 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 OR6K3Q8NGY3 331 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 OR5AK3PQ8NH89 298 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 PPP1R14CQ8TAE6 165 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 PKNOX2Q96KN3 472 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 TMEM109Q9BVC6 243 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 HOXD1Q9GZZ0 328 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 GSX1Q9H4S2 264 aaPredicted RBP12.74□□□□□ -0.37
NELFE-201ENST00000375425 ZNF395Q9H8N7 513 aaPredicted RBP12.74□□□□□ -0.37
NELFE-201ENST00000375425 BEX4Q9NWD9 120 aaPredicted RBP12.74□□□□□ -0.37
NELFE-201ENST00000375425 CARD8Q9Y2G2 431 aa12.74□□□□□ -0.37
NELFE-201ENST00000375425 H3BNH8 94 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 OIP5O43482 229 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 EFNA2O43921 213 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 SS18L1O75177 396 aaPredicted RBP12.73□□□□□ -0.37
NELFE-201ENST00000375425 NUDT14O95848 222 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 FOSL1P15407 271 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 SFTPDP35247 375 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 P2RX1P51575 399 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 ATP12AP54707 1039 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 CLDN8P56748 225 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 HBA1P69905 142 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 MAD2L1Q13257 205 aaPredicted RBP12.73□□□□□ -0.37
NELFE-201ENST00000375425 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.73□□□□□ -0.37
NELFE-201ENST00000375425 PDSS1Q5T2R2 415 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 GTF2IRD2BQ6EKJ0 949 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 GTF2IRD2Q86UP8 949 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 CXorf67Q86X51 503 aaPredicted RBP12.73□□□□□ -0.37
NELFE-201ENST00000375425 SFXN5Q8TD22 340 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 PPP1R36Q96LQ0 422 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 GLRX2Q9NS18 164 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.73□□□□□ -0.37
NELFE-201ENST00000375425 ICAM5Q9UMF0 924 aa12.73□□□□□ -0.37
NELFE-201ENST00000375425 V9GYY5 206 aaPredicted RBP12.73□□□□□ -0.37
NELFE-201ENST00000375425 GTPBP1O00178 669 aaKnown RBP12.72□□□□□ -0.37
NELFE-201ENST00000375425 ZNF195O14628 629 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 KRT16P08779 473 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 ADH6P28332 368 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 SHC1P29353 583 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 C21orf58P58505 322 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 NKX6-1P78426 367 aaPredicted RBP12.72□□□□□ -0.37
NELFE-201ENST00000375425 FOXF1Q12946 379 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 CHI3L2Q15782 390 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 TOMM34Q15785 309 aaPredicted RBP12.72□□□□□ -0.37
NELFE-201ENST00000375425 PDCD2Q16342 344 aaPredicted RBP12.72□□□□□ -0.37
NELFE-201ENST00000375425 KRT71Q3SY84 523 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 BHLHB9Q6PI77 547 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 STAC2Q6ZMT1 411 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 ZNF614Q8N883 585 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 ZNF781Q8N8C0 355 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 OR5D16Q8NGK9 328 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 FBXO27Q8NI29 283 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 GPR119Q8TDV5 335 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 ROBO4Q8WZ75 1007 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 MOAP1Q96BY2 351 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 MARK4Q96L34 752 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 KLHL15Q96M94 604 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 OR7D2Q96RA2 312 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 SDF2Q99470 211 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 C20orf27Q9GZN8 174 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 AKTIPQ9H8T0 292 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 NOP53Q9NZM5 478 aaKnown RBP12.72□□□□□ -0.37
NELFE-201ENST00000375425 DTNAQ9Y4J8 743 aa12.72□□□□□ -0.37
NELFE-201ENST00000375425 GPC6Q9Y625 555 aaPredicted RBP12.72□□□□□ -0.37
NELFE-201ENST00000375425 NUP214P35658 2090 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms