RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 OR2T33Q8NG76 320 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 GIMAP1Q8WWP7 306 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 NXPE3Q969Y0 559 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 DTD2Q96FN9 168 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 SORCS2Q96PQ0 1159 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 BCL2L10Q9HD36 194 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 UBQLN2Q9UHD9 624 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 KIAA1549LQ6ZVL6 1849 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 DAPL1A0PJW8 107 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 PRRT4C9JH25 899 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 REM1O75628 298 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 SOX30O94993 753 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 MPC2O95563 127 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 ACADLP28330 430 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 THBS2P35442 1172 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 ANXA11P50995 505 aaKnown RBP10.33□□□□□ -0.76
CCDC40-203ENST00000374877 CCR8P51685 355 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 TAS2R38P59533 333 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 TAGLNQ01995 201 aaKnown RBP10.33□□□□□ -0.76
CCDC40-203ENST00000374877 CRYZQ08257 329 aaKnown RBP10.33□□□□□ -0.76
CCDC40-203ENST00000374877 GNA13Q14344 377 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 GRK1Q15835 563 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 AANATQ16613 207 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 SLC25A35Q3KQZ1 300 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 GPR139Q6DWJ6 353 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 BHLHB9Q6PI77 547 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 TMEM65Q6PI78 240 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 TMEM255BQ8WV15 326 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 TFGQ92734 400 aaPredicted RBP10.33□□□□□ -0.76
CCDC40-203ENST00000374877 DIO2Q92813 273 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 MACROD1Q9BQ69 325 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 C1QTNF7Q9BXJ2 289 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 RHBGQ9H310 441 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 TRIM36Q9NQ86 728 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 TRANK1O15050 2925 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 A0A0G2JPF8 293 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 EDDM13A0A1B0GTR0 161 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 SYNDIG1LA6NDD5 238 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 OR5K3A6NET4 321 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 HNRNPCL2B2RXH8 293 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 HNRNPCL3B7ZW38 293 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 MT-ND4P03905 459 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 HNRNPCL4P0DMR1 293 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 RNF144AP50876 292 aaPredicted RBP10.33□□□□□ -0.76
CCDC40-203ENST00000374877 DGCR2P98153 550 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 SLC36A2Q495M3 483 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 C9orf64Q5T6V5 341 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 FAM46CQ5VWP2 391 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 ZNF620Q6ZNG0 422 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 CHMP1BQ7LBR1 199 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 SLC51BQ86UW2 128 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 OR5W2Q8NH69 310 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 NXPE2Q96DL1 559 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 EPHX3Q9H6B9 360 aa10.33□□□□□ -0.76
CCDC40-203ENST00000374877 A0A0B4J203 849 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 A0A1W2PPK0 400 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 RPS10-NUDT3A0A1W2PQS6 291 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 GPR171O14626 319 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 TSPAN4O14817 238 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 CFDP00746 253 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-203ENST00000374877 MRPL3P09001 348 aaKnown RBP10.32□□□□□ -0.76
CCDC40-203ENST00000374877 H2AFB2P0C5Z0 115 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 F8A1P23610 371 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 FPR3P25089 353 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 ACVR1BP36896 505 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 STAT5AP42229 794 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 TGM3Q08188 693 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 ST3GAL2Q16842 350 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 ESPNLQ6ZVH7 1005 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 UBE3DQ7Z6J8 389 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 OR2T35Q8NGX2 323 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 ACOT11Q8WXI4 607 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-203ENST00000374877 IL20Q9NYY1 176 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 PPIEQ9UNP9 301 aaKnown RBP10.32□□□□□ -0.76
CCDC40-203ENST00000374877 DOCK8Q8NF50 2099 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 MUC22E2RYF6 1773 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-203ENST00000374877 A0A1W2PS29 197 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 E9PI62 339 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 HRGP04196 525 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 APODP05090 189 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 NDUFV2P19404 249 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 CLCNKAP51800 687 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 CAMK2DQ13557 499 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 MFSD13AQ14CX5 517 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 HNRNPA1L2Q32P51 320 aaKnown RBP10.32□□□□□ -0.76
CCDC40-203ENST00000374877 CCNJQ5T5M9 372 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 OR4C11Q6IEV9 310 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 RTL4Q6ZR62 310 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 GRAMD2AQ8IUY3 354 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 DCUN1D3Q8IWE4 304 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 KCTD12Q96CX2 325 aaKnown RBP10.32□□□□□ -0.76
CCDC40-203ENST00000374877 NUS1Q96E22 293 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 MCHR1Q99705 422 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 RBCK1Q9BYM8 510 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 KLHL28Q9NXS3 571 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 PTTG3PQ9NZH4 202 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 THAP10Q9P2Z0 257 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-203ENST00000374877 PCYT1BQ9Y5K3 369 aaPredicted RBP10.32□□□□□ -0.76
CCDC40-203ENST00000374877 AUP1Q9Y679 476 aa10.32□□□□□ -0.76
CCDC40-203ENST00000374877 CDC42EP2O14613 210 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms