RNA–Protein interactions for RNA: ENST00000374601.7

TCEA3-201, Transcript of transcription elongation factor A3, humanhuman

TSL 1 (best) BASIC

Gene TCEA3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA3-201ENST00000374601 IGFL3Q6UXB1 125 aa12.81□□□□□ -0.36
TCEA3-201ENST00000374601 TSEN54Q7Z6J9 526 aaKnown RBP12.81□□□□□ -0.36
TCEA3-201ENST00000374601 CARM1Q86X55 608 aa12.81□□□□□ -0.36
TCEA3-201ENST00000374601 PHOSPHO1Q8TCT1 267 aa12.81□□□□□ -0.36
TCEA3-201ENST00000374601 CANT1Q8WVQ1 401 aa12.81□□□□□ -0.36
TCEA3-201ENST00000374601 GEMIN6Q8WXD5 167 aaKnown RBP12.81□□□□□ -0.36
TCEA3-201ENST00000374601 PROX1Q92786 737 aa12.81□□□□□ -0.36
TCEA3-201ENST00000374601 SLC47A1Q96FL8 570 aa12.81□□□□□ -0.36
TCEA3-201ENST00000374601 SCMH1Q96GD3 660 aa12.81□□□□□ -0.36
TCEA3-201ENST00000374601 RSRC1Q96IZ7 334 aaKnown RBP12.81□□□□□ -0.36
TCEA3-201ENST00000374601 MAGIXQ9H6Y5 334 aa12.81□□□□□ -0.36
TCEA3-201ENST00000374601 ANAPC2Q9UJX6 822 aa12.81□□□□□ -0.36
TCEA3-201ENST00000374601 SH3GLB1Q9Y371 365 aa12.81□□□□□ -0.36
TCEA3-201ENST00000374601 DSPP15924 2871 aaKnown RBP12.8□□□□□ -0.36
TCEA3-201ENST00000374601 ZZEF1O43149 2961 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 IGLV3-32A0A0A0MS00 114 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 PINLYPA6NC86 204 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 ZNF264O43296 627 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 NME2P1O60361 137 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 TRIM3O75382 744 aaPredicted RBP12.8□□□□□ -0.36
TCEA3-201ENST00000374601 P04436 131 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 UBTFL6P0CB48 400 aaPredicted RBP12.8□□□□□ -0.36
TCEA3-201ENST00000374601 GKN3PP0CG01 181 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 UMPSP11172 480 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 PRG2P13727 222 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 NME2P22392 152 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 DNASE1L1P49184 302 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 ELF3P78545 371 aaPredicted RBP12.8□□□□□ -0.36
TCEA3-201ENST00000374601 VLDLRP98155 873 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 FOXK2Q01167 660 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 ZSWIM7Q19AV6 140 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 TBCELQ5QJ74 424 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 FKBP9P1Q75LS8 142 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 RBM45Q8IUH3 476 aaKnown RBP12.8□□□□□ -0.36
TCEA3-201ENST00000374601 MISPQ8IVT2 679 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 WDSUB1Q8N9V3 476 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 VANGL1Q8TAA9 524 aaPredicted RBP12.8□□□□□ -0.36
TCEA3-201ENST00000374601 DUSP19Q8WTR2 217 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 DUS3LQ96G46 650 aaKnown RBP12.8□□□□□ -0.36
TCEA3-201ENST00000374601 SH3YL1Q96HL8 342 aaPredicted RBP12.8□□□□□ -0.36
TCEA3-201ENST00000374601 SEPHS2Q99611 448 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 LAT2Q9GZY6 243 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.8□□□□□ -0.365e-10■■□□□ 14.2
TCEA3-201ENST00000374601 EXOSC3Q9NQT5 275 aaKnown RBP12.8□□□□□ -0.36
TCEA3-201ENST00000374601 PPP4R1LQ9P1A2 415 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 SLC13A4Q9UKG4 626 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 ICAM5Q9UMF0 924 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 CARD8Q9Y2G2 431 aa12.8□□□□□ -0.36
TCEA3-201ENST00000374601 LRRC3CA6NJW4 275 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 GTPBP1O00178 669 aaKnown RBP12.79□□□□□ -0.36
TCEA3-201ENST00000374601 AP3D1O14617 1153 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 SNPHO15079 494 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 HCRTR2O43614 444 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 EIF4E2O60573 245 aaKnown RBP12.79□□□□□ -0.36
TCEA3-201ENST00000374601 TPST2O60704 377 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 SEMA7AO75326 666 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 MT-ND1P03886 318 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 SP1P08047 785 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 FAM87AP0C7U9 286 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 ENDOUP21128 410 aaKnown RBP12.79□□□□□ -0.36
TCEA3-201ENST00000374601 CNR1P21554 472 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 PSMA4P25789 261 aaKnown RBP12.79□□□□□ -0.36
TCEA3-201ENST00000374601 HTR2AP28223 471 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 ACAA2P42765 397 aaKnown RBP12.79□□□□□ -0.36
TCEA3-201ENST00000374601 MAGEA2P43356 314 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 RGS8P57771 180 aaPredicted RBP12.79□□□□□ -0.36
TCEA3-201ENST00000374601 GPR85P60893 370 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 HOXC5Q00444 222 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 C17orf67Q0P5P2 114 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 KCNAB2Q13303 367 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 COL28A1Q2UY09 1125 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 IQCCQ4KMZ1 466 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 OR5M10Q6IEU7 315 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 SLC25A25Q6KCM7 469 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 C19orf48Q6RUI8 117 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 TSPYL5Q86VY4 417 aaPredicted RBP12.79□□□□□ -0.36
TCEA3-201ENST00000374601 TMCO5AQ8N6Q1 288 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 FADS6Q8N9I5 356 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 PAPD5Q8NDF8 572 aaKnown RBP12.79□□□□□ -0.36
TCEA3-201ENST00000374601 OR6T1Q8NGN1 323 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 POP5Q969H6 163 aaKnown RBP12.79□□□□□ -0.36
TCEA3-201ENST00000374601 SLC35B4Q969S0 331 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 ZNF524Q96C55 264 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 ABHD17AQ96GS6 310 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 TMEM41AQ96HV5 264 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 C7orf34Q96L11 122 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 C5orf34Q96MH7 638 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 CNTNAP3BQ96NU0 1288 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 PRR14Q9BWN1 585 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 UGT2B28Q9BY64 529 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 CNTNAP3Q9BZ76 1288 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 AMBRA1Q9C0C7 1298 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 ARMC7Q9H6L4 198 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 KLHL1Q9NR64 748 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 CCM2LQ9NUG4 571 aaPredicted RBP12.79□□□□□ -0.36
TCEA3-201ENST00000374601 KLHL28Q9NXS3 571 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 TUBA8Q9NY65 449 aaPredicted RBP12.79□□□□□ -0.36
TCEA3-201ENST00000374601 AURKCQ9UQB9 309 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 TP53TG5Q9Y2B4 290 aa12.79□□□□□ -0.36
TCEA3-201ENST00000374601 SLC9A8Q9Y2E8 581 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms