RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 STUB1Q9UNE7 303 aa11.21□□□□□ -0.61
HMGCL-202ENST00000374487 TMEM131Q92545 1883 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 NPIPA5A0A0B4J1W7 369 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 PNMA8CA0A1B0GUJ8 204 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 NPIPA7E9PJI5 369 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 WWP2O00308 870 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 TM4SF5O14894 197 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 CHST10O43529 356 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 SDC3O75056 442 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 UPK1BO75841 260 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 AK1P00568 194 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 CT62P0C5K7 136 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 SLC35E2P0CK97 266 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 NPIPA8P0DM63 369 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 PRG2P13727 222 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 HOXD12P35452 270 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 NUDT1P36639 197 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 CDH11P55287 796 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 WNT4P56705 351 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 POU6F2P78424 691 aaPredicted RBP11.21□□□□□ -0.62
HMGCL-202ENST00000374487 ZNF155Q12901 538 aaPredicted RBP11.21□□□□□ -0.62
HMGCL-202ENST00000374487 SLC13A2Q13183 592 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 MINDY4Q4G0A6 757 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 SPANXN2Q5MJ10 180 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 MCATQ8IVS2 390 aaKnown RBP11.21□□□□□ -0.62
HMGCL-202ENST00000374487 PHC2Q8IXK0 858 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 VWA5B2Q8N398 1253 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 C19orf47Q8N9M1 422 aaKnown RBP11.21□□□□□ -0.62
HMGCL-202ENST00000374487 OR2T33Q8NG76 320 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 FGF11Q92914 225 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 ANKRD9Q96BM1 317 aaPredicted RBP11.21□□□□□ -0.62
HMGCL-202ENST00000374487 CEP19Q96LK0 163 aa11.21□□□□□ -0.62
HMGCL-202ENST00000374487 H2AFY2Q9P0M6 372 aaPredicted RBP11.21□□□□□ -0.62
HMGCL-202ENST00000374487 CRNNQ9UBG3 495 aaPredicted RBP11.21□□□□□ -0.62
HMGCL-202ENST00000374487 SPIN1Q9Y657 262 aaPredicted RBP11.21□□□□□ -0.62
HMGCL-202ENST00000374487 CDHR4A6H8M9 788 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 SLC9B1P1A6NJY1 282 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 SURF4O15260 269 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 TBX1O43435 398 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 COQ9O75208 318 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 ENDOUP21128 410 aaKnown RBP11.2□□□□□ -0.62
HMGCL-202ENST00000374487 ATP6V1E1P36543 226 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 CRYBB2P43320 205 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 ID4P47928 161 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 SKP1P63208 163 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 PRKCDQ05655 676 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 MGAT2Q10469 447 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 OR1Q1Q15612 314 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 ZNHIT3Q15649 155 aaPredicted RBP11.2□□□□□ -0.62
HMGCL-202ENST00000374487 ZNF181Q2M3W8 571 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 TMEM44Q2T9K0 475 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 ZNF620Q6ZNG0 422 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 PLEKHG7Q6ZR37 379 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 LAPTM4BQ86VI4 370 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 CDK20Q8IZL9 346 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 PARP16Q8N5Y8 322 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 ZNF614Q8N883 585 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 OR52R1Q8NGF1 315 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 OR4Q3Q8NH05 313 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 OTULINQ96BN8 352 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 RBM18Q96H35 190 aaKnown RBP11.2□□□□□ -0.62
HMGCL-202ENST00000374487 LRRC61Q9BV99 259 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 RBCK1Q9BYM8 510 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 RERGLQ9H628 205 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 FGF20Q9NP95 211 aaPredicted RBP11.2□□□□□ -0.62
HMGCL-202ENST00000374487 GPR27Q9NS67 375 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 MRPS18AQ9NVS2 196 aaKnown RBP11.2□□□□□ -0.62
HMGCL-202ENST00000374487 DLL3Q9NYJ7 618 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 CDH10Q9Y6N8 788 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 A0A0A6YYC8 382 aaPredicted RBP11.2□□□□□ -0.62
HMGCL-202ENST00000374487 ISPDA4D126 451 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 KDM4EB2RXH2 506 aaPredicted RBP11.2□□□□□ -0.62
HMGCL-202ENST00000374487 I3L1I5 382 aaPredicted RBP11.2□□□□□ -0.62
HMGCL-202ENST00000374487 CDC42EP2O14613 210 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 KLF4O43474 513 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 HMGN1P05114 100 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 CTSBP07858 339 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 CD59P13987 128 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 RPS4Y1P22090 263 aaKnown RBP11.2□□□□□ -0.62
HMGCL-202ENST00000374487 RPS19P39019 145 aaKnown RBP11.2□□□□□ -0.62
HMGCL-202ENST00000374487 MAZP56270 477 aaKnown RBP11.2□□□□□ -0.62
HMGCL-202ENST00000374487 NXPH1P58417 271 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 STX4Q12846 297 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 PGGHGQ32M88 737 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 FLYWCH1Q4VC44 716 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 OR2G6Q5TZ20 316 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 HSDL2Q6YN16 418 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 SHFQ7M4L6 423 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 AVL9Q8NBF6 648 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 DEFB124Q8NES8 71 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 GATAD2BQ8WXI9 593 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 PMM1Q92871 262 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 TMEM203Q969S6 136 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 CTHRC1Q96CG8 243 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 SAMD8Q96LT4 415 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 POLE4Q9NR33 117 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 SNTG1Q9NSN8 517 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 MED17Q9NVC6 651 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 IRAK4Q9NWZ3 460 aa11.2□□□□□ -0.62
HMGCL-202ENST00000374487 KCNE5Q9UJ90 142 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms