RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 SLC29A1Q99808 456 aa13.42□□□□□ -0.26
SMPDL3B-201ENST00000373888 ARMC7Q9H6L4 198 aa13.42□□□□□ -0.26
SMPDL3B-201ENST00000373888 ZNF552Q9H707 407 aaPredicted RBP13.42□□□□□ -0.26
SMPDL3B-201ENST00000373888 HPF1Q9NWY4 346 aa13.42□□□□□ -0.26
SMPDL3B-201ENST00000373888 CPAMD8Q8IZJ3 1885 aa13.42□□□□□ -0.26
SMPDL3B-201ENST00000373888 IGF2RP11717 2491 aa13.42□□□□□ -0.26
SMPDL3B-201ENST00000373888 MED13Q9UHV7 2174 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 C7orf72A4D263 438 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 CDHR4A6H8M9 788 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 TMEM8BA6NDV4 472 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 A6NL46 340 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 TNFAIP8O95379 198 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 CST1P01037 141 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 UBTFL6P0CB48 400 aaPredicted RBP13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 ZNF23P17027 643 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 MAGEA2P43356 314 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 CYB561P49447 251 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 HLCSP50747 726 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 CCL11P51671 97 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 TMPRSS3P57727 454 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 RPP38P78345 283 aaKnown RBP13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 PLAURQ03405 335 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 EPS8Q12929 822 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 IFI44LQ53G44 452 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 MRPL2Q5T653 305 aaKnown RBP13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 UGT2A3Q6UWM9 527 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 ZDHHC13Q8IUH4 622 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 GRAMD2AQ8IUY3 354 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 CHERPQ8IWX8 916 aaKnown RBP13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 CLIP4Q8N3C7 705 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 FDCSPQ8NFU4 85 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 PAQR8Q8TEZ7 354 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 GEMIN6Q8WXD5 167 aaKnown RBP13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 ZCCHC14Q8WYQ9 949 aaKnown RBP13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 ARHGDIGQ99819 225 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 ANKRD60Q9BZ19 345 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 TBL1XR1Q9BZK7 514 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 RNF32Q9H0A6 362 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 CPNE5Q9HCH3 593 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 SLC35A3Q9Y2D2 325 aa13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 URB1O60287 2271 aaKnown RBP13.41□□□□□ -0.26
SMPDL3B-201ENST00000373888 A6NHS1 94 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 H3BNH8 94 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 GNGT2O14610 69 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 ADAM10O14672 748 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 SMNDC1O75940 238 aaKnown RBP eCLIP13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 ENDOUP21128 410 aaKnown RBP13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 ITPKBP27987 946 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 CASRP41180 1078 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 KCNC4Q03721 635 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 MFAP5Q13361 173 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 SNTA1Q13424 505 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 RAPSNQ13702 412 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 CD226Q15762 336 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 NHSL2Q5HYW2 709 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 C6orf52Q5T4I8 152 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 RTL4Q6ZR62 310 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 CYP4Z2PQ8N1L4 340 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 FAM71CQ8NEG0 241 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 SLC35B4Q969S0 331 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 CNBD2Q96M20 576 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 EVA1AQ9H8M9 152 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 IL1RAPQ9NPH3 570 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 RLIMQ9NVW2 624 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 KLHL28Q9NXS3 571 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 SMPD3Q9NY59 655 aaPredicted RBP13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 SLC13A4Q9UKG4 626 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 SLC9A8Q9Y2E8 581 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 SH3GLB1Q9Y371 365 aa13.4□□□□□ -0.26
SMPDL3B-201ENST00000373888 PRAMEF25A6NGN4 478 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 BCAS1O75363 584 aaPredicted RBP13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 WDPCPO95876 746 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 TNFRSF1BP20333 461 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 PTGDSP41222 190 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 CASP3P42574 277 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 CLK3P49761 638 aaKnown RBP13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 ST13P50502 369 aaKnown RBP13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 RNF144AP50876 292 aaPredicted RBP13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 ALDH3A2P51648 485 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 GAS1P54826 345 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 TUBA3CQ13748 450 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 TUBA3EQ6PEY2 450 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 IGFL2Q6UWQ7 119 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 LINC00696Q6ZRV3 163 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 MARCH3Q86UD3 253 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 ZNF227Q86WZ6 799 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 CARM1Q86X55 608 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 MISPQ8IVT2 679 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 TFAP2CQ92754 450 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 NTNG2Q96CW9 530 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 C7orf34Q96L11 122 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 UTP23Q9BRU9 249 aaKnown RBP13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 RTN4RQ9BZR6 473 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 NTN4Q9HB63 628 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 ANKRD10Q9NXR5 420 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 DNAJB12Q9NXW2 375 aaKnown RBP13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 CNIH4Q9P003 139 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 DMXL2Q8TDJ6 3036 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 G3V2T6 193 aa13.39□□□□□ -0.27
SMPDL3B-201ENST00000373888 H0YAE9 185 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms