RNA–Protein interactions for RNA: ENST00000373602.9

CCDC28B-201, Transcript of coiled-coil domain containing 28B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28B, Length 1,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-201ENST00000373602 SOAT1P35610 550 aa19.48■□□□□ 0.71
CCDC28B-201ENST00000373602 CD79BP40259 229 aa19.48■□□□□ 0.71
CCDC28B-201ENST00000373602 DDX59Q5T1V6 619 aaKnown RBP eCLIP19.48■□□□□ 0.71
CCDC28B-201ENST00000373602 FBXW10Q5XX13 1052 aa19.48■□□□□ 0.71
CCDC28B-201ENST00000373602 C6orf120Q7Z4R8 191 aa19.48■□□□□ 0.71
CCDC28B-201ENST00000373602 OR5D16Q8NGK9 328 aa19.48■□□□□ 0.71
CCDC28B-201ENST00000373602 DPY30Q9C005 99 aa19.48■□□□□ 0.71
CCDC28B-201ENST00000373602 OPN3Q9H1Y3 402 aaPredicted RBP19.48■□□□□ 0.71
CCDC28B-201ENST00000373602 CXXC4Q9H2H0 198 aa19.48■□□□□ 0.71
CCDC28B-201ENST00000373602 SERHL2Q9H4I8 314 aa19.48■□□□□ 0.71
CCDC28B-201ENST00000373602 PAQR5Q9NXK6 330 aaPredicted RBP19.48■□□□□ 0.71
CCDC28B-201ENST00000373602 NDRG3Q9UGV2 375 aa19.48■□□□□ 0.71
CCDC28B-201ENST00000373602 HIVEP1P15822 2718 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 H3BNH8 94 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 ANKRD28O15084 1053 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 OIP5O43482 229 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 SCN2BO60939 215 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 HRGP04196 525 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 EIF1P41567 113 aaKnown RBP19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 SLC6A8P48029 635 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 BST1Q10588 318 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 CBLN3Q6UW01 205 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 ESPNLQ6ZVH7 1005 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 FAM214BQ7L5A3 538 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 CHDHQ8NE62 594 aaPredicted RBP19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 OR2V1Q8NHB1 315 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 SDF2Q99470 211 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 NUF2Q9BZD4 464 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 PLEKHF2Q9H8W4 249 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 PNPOQ9NVS9 261 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 ELOVL5Q9NYP7 299 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 ICAM5Q9UMF0 924 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 PLEKHA6Q9Y2H5 1048 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 TESMINQ9Y4I5 508 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 ABCA4P78363 2273 aa19.47■□□□□ 0.71
CCDC28B-201ENST00000373602 MED13LQ71F56 2210 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 A0A0J9YW62 118 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 DUXAA6NLW8 204 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 OPN1LWP04000 364 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 LBPP18428 481 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 MATN1P21941 496 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 DNASE1P24855 282 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 P2RX1P51575 399 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 SUMO3P55854 103 aaPredicted RBP19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 RPS26P62854 115 aaKnown RBP19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 PHC1P78364 1004 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 PAMR1Q6UXH9 720 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 CLEC4FQ8N1N0 589 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 TESCQ96BS2 214 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 PAIP2Q9BPZ3 127 aaKnown RBP19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 SLC39A3Q9BRY0 314 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 PRRG4Q9BZD6 226 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 TMEM185BQ9H7F4 350 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 MEAF6Q9HAF1 191 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 MCTS1Q9ULC4 181 aaKnown RBP19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 PCDHGB4Q9UN71 923 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 PROCRQ9UNN8 238 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 CARD8Q9Y2G2 431 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 DTNAQ9Y4J8 743 aa19.46■□□□□ 0.71
CCDC28B-201ENST00000373602 RNF103-CHMP3A0A140T963 221 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 PRSS51A0A1B0GVH4 220 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 TNFSF11O14788 317 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 CASKO14936 926 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 CXCL13O43927 109 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 AK1P00568 194 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 IL11P20809 199 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 ME2P23368 584 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 ELK4P28324 431 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 ADH6P28332 368 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 RNF144AP50876 292 aaPredicted RBP19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 FOXF1Q12946 379 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 PDSS1Q5T2R2 415 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 ANXA8L1Q5VT79 327 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 HHATQ5VTY9 493 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 PPP4R4Q6NUP7 873 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 ZNF610Q8N9Z0 462 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 OR4A15Q8NGL6 344 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 GMPPAQ96IJ6 420 aaPredicted RBP19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 SLC35G5Q96KT7 338 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 NMUR2Q9GZQ4 415 aa19.45■□□□□ 0.7
CCDC28B-201ENST00000373602 GTPBP1O00178 669 aaKnown RBP19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 SYNGR4O95473 234 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 POU2F1P14859 743 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 UGT2B10P36537 528 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 CLNS1AP54105 237 aaKnown RBP19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 WDR4P57081 412 aaKnown RBP19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 POU4F3Q15319 338 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 HBMQ6B0K9 141 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 OGFOD2Q6N063 350 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 ANKRD46Q86W74 232 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 LILRA2Q8N149 483 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 ZNF614Q8N883 585 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 ANKRD42Q8N9B4 389 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 VPS37AQ8NEZ2 397 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 OR6K3Q8NGY3 331 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 MIPOL1Q8TD10 442 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 GPR119Q8TDV5 335 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 MBD6Q96DN6 1003 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 KLHL15Q96M94 604 aa19.44■□□□□ 0.7
CCDC28B-201ENST00000373602 WFIKKN1Q96NZ8 548 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms