RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 WNT1P04628 370 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 SULT1A3P0DMM9 295 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 SULT1A4P0DMN0 295 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 CEBPBP17676 345 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 BTN1A1Q13410 526 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 FCRLBQ6BAA4 426 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 CDC73Q6P1J9 531 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 LCTLQ6UWM7 567 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 SETD7Q8WTS6 366 aaKnown RBP13.79□□□□□ -0.2
COL9A2-202ENST00000372748 RBPMSQ93062 196 aaKnown RBP13.79□□□□□ -0.2
COL9A2-202ENST00000372748 HGDQ93099 445 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 RAD51AP1Q96B01 352 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 LRIG1Q96JA1 1093 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 PINK1Q9BXM7 581 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 ENKD1Q9H0I2 346 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 EPHX3Q9H6B9 360 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 SYNDIG1Q9H7V2 258 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 SPATA2Q9UM82 520 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 DNAH14Q0VDD8 3507 aa13.79□□□□□ -0.2
COL9A2-202ENST00000372748 RGS11O94810 467 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 VIPR2P41587 438 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 CLDN2P57739 230 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 PRSS42Q7Z5A4 293 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 SPRED2Q7Z698 418 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 GPALPP1Q8IXQ4 340 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 RPLP0P6Q8NHW5 317 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 ADAMTS14Q8WXS8 1223 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 THAP4Q8WY91 577 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 TFGQ92734 400 aaPredicted RBP13.78□□□□□ -0.2
COL9A2-202ENST00000372748 RGMAQ96B86 450 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 DDOQ99489 341 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 GSX2Q9BZM3 304 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 UBQLN3Q9H347 655 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 AUNIPQ9H7T9 357 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 TRIM36Q9NQ86 728 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 G3V3Q6 166 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 TEX46H3BTG2 121 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 CASC3O15234 703 aaKnown RBP13.78□□□□□ -0.2
COL9A2-202ENST00000372748 NFATC1O95644 943 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 ADH5P11766 374 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 NAGAP17050 411 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 CTRB1P17538 263 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 FPR3P25089 353 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 RGS8P57771 180 aaPredicted RBP13.78□□□□□ -0.2
COL9A2-202ENST00000372748 TAS2R38P59533 333 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 SNTB2Q13425 540 aaKnown RBP13.78□□□□□ -0.2
COL9A2-202ENST00000372748 CTRB2Q6GPI1 263 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 ZNF793Q6ZN11 406 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 ZBTB44Q8NCP5 570 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 OR2L2Q8NH16 312 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 ABHD4Q8TB40 342 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 TRIM43Q96BQ3 446 aaPredicted RBP13.78□□□□□ -0.2
COL9A2-202ENST00000372748 CAMK1GQ96NX5 476 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 OR52A5Q9H2C5 316 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 OR51V1Q9H2C8 321 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 SLC38A1Q9H2H9 487 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 RHBGQ9H310 441 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 MAB21L2Q9Y586 359 aa13.78□□□□□ -0.2
COL9A2-202ENST00000372748 ATP6V1G2-DDX39BF2Z307 99 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 J3QLW9 94 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 SLC9A3R1O14745 358 aaPredicted RBP13.77□□□□□ -0.2
COL9A2-202ENST00000372748 HYAL3O43820 417 aaPredicted RBP13.77□□□□□ -0.2
COL9A2-202ENST00000372748 TBX19O60806 448 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 PRNPP04156 253 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 ADRB3P13945 408 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 DRD2P14416 443 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 ZNF19P17023 458 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 NDUFV2P19404 249 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 F8A1P23610 371 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 C9orf64Q5T6V5 341 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 NLRC3Q7RTR2 1065 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 SRFBP1Q8NEF9 429 aaKnown RBP13.77□□□□□ -0.2
COL9A2-202ENST00000372748 OR51Q1Q8NH59 317 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 ACOT11Q8WXI4 607 aaPredicted RBP13.77□□□□□ -0.2
COL9A2-202ENST00000372748 ARSGQ96EG1 525 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 MCHR1Q99705 422 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 HCN3Q9P1Z3 774 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 SCP2D1Q9UJQ7 156 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 IRAK3Q9Y616 596 aa13.77□□□□□ -0.2
COL9A2-202ENST00000372748 A0A0G2JPF8 293 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 A0A1W2PRG6 482 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 OTOL1A6NHN0 477 aaPredicted RBP13.77□□□□□ -0.21
COL9A2-202ENST00000372748 HNRNPCL2B2RXH8 293 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 HNRNPCL3B7ZW38 293 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 J3QRE1 110 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 MAGEB4O15481 346 aaPredicted RBP13.77□□□□□ -0.21
COL9A2-202ENST00000372748 HOXD4P09016 255 aaPredicted RBP13.77□□□□□ -0.21
COL9A2-202ENST00000372748 HNRNPCL4P0DMR1 293 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 DDX6P26196 483 aaKnown RBP eCLIP13.77□□□□□ -0.21
COL9A2-202ENST00000372748 NTSP30990 170 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 LCN1P31025 176 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 STAT5AP42229 794 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 TSPAN5P62079 268 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 TGM3Q08188 693 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 C6orf132Q5T0Z8 1188 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 GDF7Q7Z4P5 450 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 MRPL43Q8N983 215 aaKnown RBP13.77□□□□□ -0.21
COL9A2-202ENST00000372748 HMGB4Q8WW32 186 aa13.77□□□□□ -0.21
COL9A2-202ENST00000372748 KCTD12Q96CX2 325 aaKnown RBP13.77□□□□□ -0.21
COL9A2-202ENST00000372748 CNRIP1Q96F85 164 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms