RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ECI2O75521 394 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 AP2A2O94973 939 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 IGHV2-5P01817 119 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 ALDOBP05062 364 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 NR2C1P13056 603 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 DRD2P14416 443 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 PKMP14618 531 aaKnown RBP8.27□□□□□ -1.09
ATG4A-203ENST00000372232 PPP3CBP16298 524 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 UQCRC2P22695 453 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 PAX6P26367 422 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 SELENOPP49908 381 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 RAB2AP61019 212 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 SMAD3P84022 425 aaKnown RBP8.27□□□□□ -1.09
ATG4A-203ENST00000372232 TWF1Q12792 350 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 KRT33BQ14525 404 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 FBXO48Q5FWF7 155 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 CTSL3PQ5NE16 218 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 GPRC6AQ5T6X5 926 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 RAET1GQ6H3X3 334 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 SCIMPQ6UWF3 145 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 TMEM91Q6ZNR0 172 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 DCUN1D3Q8IWE4 304 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 OR4N4Q8N0Y3 316 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 FBXO39Q8N4B4 442 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 IL22RA1Q8N6P7 574 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 B3GNT7Q8NFL0 401 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 OR4A15Q8NGL6 344 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 DTD1Q8TEA8 209 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 ZC3H10Q96K80 434 aaKnown RBP8.27□□□□□ -1.09
ATG4A-203ENST00000372232 SLC22A12Q96S37 553 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 EGLN1Q9GZT9 426 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 DPAGT1Q9H3H5 408 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 METTL17Q9H7H0 456 aaPredicted RBP8.27□□□□□ -1.09
ATG4A-203ENST00000372232 BPIFA1Q9NP55 256 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 SLC6A20Q9NP91 592 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 GFOD1Q9NXC2 390 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 LHX3Q9UBR4 397 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 CBLCQ9ULV8 474 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 CHST2Q9Y4C5 530 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 OR51B4Q9Y5P0 310 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 CFAP20Q9Y6A4 193 aaKnown RBP8.27□□□□□ -1.09
ATG4A-203ENST00000372232 SCN5AQ14524 2016 aa8.27□□□□□ -1.09
ATG4A-203ENST00000372232 LOC100289279A0A1B0GTE1 492 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 A0A1B0GTL3 188 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 ZNF879B4DU55 563 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 FAM227AF5H4B4 570 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 PRRG1O14668 218 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 TOX3O15405 576 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 TPST2O60704 377 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 MED6O75586 246 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 LATS1O95835 1130 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 IFNA2P01563 188 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 CBSLP0DN79 551 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 PEPDP12955 493 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 NFYAP23511 347 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 S100A11P31949 105 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 CBSP35520 551 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 BDKRB1P46663 353 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 NUTF2P61970 127 aaKnown RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 ZXDBP98169 803 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 ILF3Q12906 894 aaKnown RBP eCLIP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 LCP2Q13094 533 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 GSG1Q2KHT4 349 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 ZRANB3Q5FWF4 1079 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 ANKS6Q68DC2 871 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 CASP12Q6UXS9 341 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 FAM122BQ7Z309 247 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 SLC39A11Q8N1S5 342 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 SIDT2Q8NBJ9 832 aaKnown RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 OR10J5Q8NHC4 309 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 THAP6Q8TBB0 222 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 SELENOMQ8WWX9 145 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 VWCEQ96DN2 955 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 LCORQ96JN0 433 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 LRR1Q96L50 414 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 ZNF559Q9BR84 538 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 LRFN3Q9BTN0 628 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 OPN3Q9H1Y3 402 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 ABCG8Q9H221 673 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 SEMA6CQ9H3T2 930 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 CERS4Q9HA82 394 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 BARX1Q9HBU1 254 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 TXNL4BQ9NX01 149 aaKnown RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 ZNF226Q9NYT6 803 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 EIF2B4Q9UI10 523 aaKnown RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 LAMA2P24043 3122 aaKnown RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 BTBD17A6NE02 478 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 NPEPPSL1A6NEC2 478 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 TMEM200CA6NKL6 621 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 H0Y8X5 98 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 CACNB4O00305 520 aaPredicted RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 PPIHO43447 177 aaKnown RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 KLK8O60259 260 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 PRAMEF2O60811 474 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 SEMA7AO75326 666 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 TUSC2O75896 110 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 AQP8O94778 261 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 RNH1P13489 461 aaKnown RBP8.26□□□□□ -1.09
ATG4A-203ENST00000372232 G0S2P27469 103 aa8.26□□□□□ -1.09
ATG4A-203ENST00000372232 SOX3P41225 446 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms