RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 RASD1Q9Y272 281 aa8.53□□□□□ -1.04
SMARCA1-202ENST00000371122 TTC28Q96AY4 2481 aa8.52□□□□□ -1.04
SMARCA1-202ENST00000371122 TRAV18A0A075B6X5 111 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 TLX3O43711 291 aaPredicted RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 PRICKLE3O43900 615 aaPredicted RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 GATBO75879 557 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 SERPINA3P01011 423 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 PRH1P02810 166 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 KLK3P07288 261 aaPredicted RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 SSTR2P30874 369 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 RPL34P49207 117 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 VASPP50552 380 aaPredicted RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 AP3S2P59780 193 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 SRYQ05066 204 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 ELOCQ15369 112 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 PUS10Q3MIT2 529 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 CMPK2Q5EBM0 449 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 METTL4Q8N3J2 472 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 SUN5Q8TC36 379 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 TMEM255BQ8WV15 326 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 PBX4Q9BYU1 374 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 DEFB126Q9BYW3 111 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 PPIL3Q9H2H8 161 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 ACTL8Q9H568 366 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 MYOFQ9NZM1 2061 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 KIAA1217Q5T5P2 1943 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 SCN2AQ99250 2005 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 NOTOA8MTQ0 251 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 WRBO00258 174 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 CTSLP07711 333 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 ARAFP10398 606 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 MAKP20794 623 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 MAGEA8P43361 318 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 TMEM35AQ53FP2 167 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 CYHR1Q6ZMK1 362 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 NKAIN4Q8IVV8 208 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 DNAJC22Q8N4W6 341 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 ZNF511Q8NB15 262 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 ORAI1Q96D31 301 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 TNFRSF13CQ96RJ3 184 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 ORAI3Q9BRQ5 295 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 SLC6A15Q9H2J7 730 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 OR51B6Q9H340 312 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 MYNNQ9NPC7 610 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 C12orf4Q9NQ89 552 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 ZNFX1Q9P2E3 1918 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 RANBP2P49792 3224 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 IGHV3-20A0A0C4DH32 117 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 H0YIV9 168 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 SMLR1H3BR10 107 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 C1QCP02747 245 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 DNASE1P24855 282 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 ATP5A1P25705 553 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 STOMP27105 288 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 RPS25P62851 125 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 PUDPQ08623 228 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 MRPL58Q14197 206 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 ELOAQ14241 798 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 GPR18Q14330 331 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 GRM7Q14831 915 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 FAM109BQ6ICB4 259 aaPredicted RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 ANKRD54Q6NXT1 300 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 LCTLQ6UWM7 567 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 BTLAQ7Z6A9 289 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 MCATQ8IVS2 390 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 L3MBTL4Q8NA19 623 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 HMGCLL1Q8TB92 370 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 TRMT10AQ8TBZ6 339 aaKnown RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 HCAR2Q8TDS4 363 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 DNAJA4Q8WW22 397 aaPredicted RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 TM4SF18Q96CE8 201 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 MSANTD3Q96H12 275 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 ZNF701Q9NV72 531 aaPredicted RBP8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 ABCD2Q9UBJ2 740 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 TBC1D29Q9UFV1 150 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 PFDN2Q9UHV9 154 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 SPEF1Q9Y4P9 236 aa8.52□□□□□ -1.05
SMARCA1-202ENST00000371122 A0A0G2JPF8 293 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 OR2AT4A6NND4 320 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 KDM4EB2RXH2 506 aaPredicted RBP8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 HNRNPCL3B7ZW38 293 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 VNN2O95498 520 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 SLC2A10O95528 541 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 FUCA1P04066 466 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 HNRNPCL4P0DMR1 293 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 PCSK2P16519 638 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 RAB3BP20337 219 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 BCL6P41182 706 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 POU3F4P49335 361 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 PDX1P52945 283 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 ZP2Q05996 745 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 TMEM44Q2T9K0 475 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 RAET1LQ5VY80 246 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 OR5T2Q8NGG2 359 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 OR5K2Q8NHB8 316 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 HS6ST2Q96MM7 605 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 EPHA6Q9UF33 1036 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 CACNA1HO95180 2353 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 MYO15AQ9UKN7 3530 aa8.51□□□□□ -1.05
SMARCA1-202ENST00000371122 AGAP5A6NIR3 686 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms