RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 MLXQ9UH92 298 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 CA14Q9ULX7 337 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 SLC6A5Q9Y345 797 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 PAPPAQ13219 1627 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 SLC5A10A0PJK1 596 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 J3KTA2 159 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 HOXC11O43248 304 aaPredicted RBP11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 SYPP08247 313 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 JUNBP17275 347 aaPredicted RBP11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 ATF4P18848 351 aaPredicted RBP11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 ADARB1P78563 741 aaKnown RBP11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 RPL19P84098 196 aaKnown RBP11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 OR1Q1Q15612 314 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 CDNFQ49AH0 187 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 RAET1LQ5VY80 246 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 GPR139Q6DWJ6 353 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 FAM71E1Q6IPT2 247 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 TMEM184AQ6ZMB5 413 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 ADAMTS14Q8WXS8 1223 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 NAA50Q9GZZ1 169 aaKnown RBP11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 CXorf36Q9H7Y0 433 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 LMAN1LQ9HAT1 526 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 UBQLN4Q9NRR5 601 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 VSTM5A8MXK1 200 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 H0YGG7 62 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 GASTP01350 101 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 CCNOP22674 350 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 TNFSF8P32971 234 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 CEBPGP53567 150 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 ARF3P61204 181 aaPredicted RBP11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 TNFRSF17Q02223 184 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 TLE3Q04726 772 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 GLO1Q04760 184 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 ATXN7L3Q14CW9 347 aaPredicted RBP11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 DESI1Q6ICB0 168 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 HMBOX1Q6NT76 420 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 LINC00299Q6ZSB3 139 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 ANKRD33Q7Z3H0 272 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 NLRP8Q86W28 1048 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 POGLUT1Q8NBL1 392 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 C7orf50Q9BRJ6 194 aaKnown RBP11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 TREM1Q9NP99 234 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 HPF1Q9NWY4 346 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 RREB1Q92766 1687 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 TRBV4-1A0A0J9YWV2 114 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 A8MVJ9 347 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 TARM1B6A8C7 271 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 H3BUI4 141 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 ANKRD28O15084 1053 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF43P17038 809 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 KCNJ5P48544 419 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 PDE7AQ13946 482 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 EFR3AQ14156 821 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 LEXMQ3ZCV2 418 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 FAM69BQ5VUD6 431 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 TPRA1Q86W33 373 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 FTMTQ8N4E7 242 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 SLC7A13Q8TCU3 470 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 TBC1D20Q96BZ9 403 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 DNAJA3Q96EY1 480 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF587Q96SQ5 575 aaPredicted RBP11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 ZIC5Q96T25 663 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 NT5DC2Q9H857 520 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 A4GALTQ9NPC4 353 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF337Q9Y3M9 751 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 NOX1Q9Y5S8 564 aa11.11□□□□□ -0.63
DEPDC1-201ENST00000370966 NPIPA5A0A0B4J1W7 369 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 NPIPA7E9PJI5 369 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 GPRIN2O60269 458 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 NPIPA8P0DM63 369 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 PTGER1P34995 402 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 DCAF7P61962 342 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 C3orf38Q5JPI3 329 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 CCNJQ5T5M9 372 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 SFRP4Q6FHJ7 346 aaPredicted RBP11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 Q6ZPB1 254 aaPredicted RBP11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 ZNF595Q8IYB9 648 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 SDR9C7Q8NEX9 313 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 TM4SF18Q96CE8 201 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 CCDC120Q96HB5 630 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 ARL6Q9H0F7 186 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 SPATA6Q9NWH7 488 aaPredicted RBP11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 TEX10Q9NXF1 929 aaPredicted RBP11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 F5H0A9 414 aaPredicted RBP11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 LAMTOR5O43504 91 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 PRAF2O60831 178 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 SDC3O75056 442 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 TOXO94900 526 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 IL33O95760 270 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 SCGB1D2O95969 90 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 PVRP15151 417 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 DLX2Q07687 328 aaPredicted RBP11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 MRPL49Q13405 166 aaKnown RBP11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 EXOSC7Q15024 291 aaKnown RBP11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 FAM76BQ5HYJ3 339 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 SYT6Q5T7P8 510 aaPredicted RBP11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 BCL2L15Q5TBC7 163 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 HACD4Q5VWC8 232 aa11.1□□□□□ -0.63
DEPDC1-201ENST00000370966 TANGO2Q6ICL3 276 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms