RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 POM121CA8CG34 1229 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 RASGRP3Q8IV61 690 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 SERINC2Q96SA4 455 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 HOXD1Q9GZZ0 328 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 SLC2A4RGQ9NR83 387 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 UBE2J1Q9Y385 318 aaPredicted RBP16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 KCNJ13O60928 360 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 CLEC3AO75596 197 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 DIRAS3O95661 229 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 CD6P30203 668 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 UBXN2BQ14CS0 331 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 ARL6IP1Q15041 203 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 CARD17Q5XLA6 110 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 HBMQ6B0K9 141 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 SBSNQ6UWP8 590 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 ZFP57Q9NU63 452 aa16.1■□□□□ 0.17
PTP4A1-201ENST00000370651 RAD1O60671 282 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 UBBP0CG47 229 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 UBCP0CG48 685 aaKnown RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 ZNF84P51523 738 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 CSNK2A1P68400 391 aaPredicted RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 SEMA3BQ13214 749 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 CSNK2A3Q8NEV1 391 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 UBTD2Q8WUN7 234 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 BORCS8Q96FH0 119 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 OSGIN1Q9UJX0 560 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 ZNF195O14628 629 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 AGPAT2O15120 278 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 TRA2BP62995 288 aaKnown RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 SLC35A2P78381 396 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 MFSD13AQ14CX5 517 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 P2RY14Q15391 338 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 SLC16A9Q7RTY1 509 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 VRK2Q86Y07 508 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 C7orf61Q8IZ16 206 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 CDS1Q92903 461 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 ISG20Q96AZ6 181 aaKnown RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 PEX11GQ96HA9 241 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 KLF16Q9BXK1 252 aaPredicted RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 H0YIV9 168 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 SULT1C2O00338 296 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 IL32P24001 234 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 DDOSTP39656 456 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 POU3F4P49335 361 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 OPCMLQ14982 345 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 ESCO2Q56NI9 601 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 PDSS1Q5T2R2 415 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 FIP1L1Q6UN15 594 aaKnown RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 SLC35B4Q969S0 331 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 KIAA1143Q96AT1 154 aaPredicted RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 DUS3LQ96G46 650 aaKnown RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 CPEB1Q9BZB8 566 aaKnown RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 PITHD1Q9GZP4 211 aaPredicted RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 DKKL1Q9UK85 242 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 DIMT1Q9UNQ2 313 aaKnown RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 SYT7O43581 403 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 RAB40ALP0C0E4 278 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 SLC2A5P22732 501 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 HOXD9P28356 352 aaPredicted RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 ARHGAP19Q14CB8 494 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 SLC6A19Q695T7 634 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 C3orf33Q6P1S2 294 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 CREB3L2Q70SY1 520 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 RAB40AQ8WXH6 277 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 UBE2FQ969M7 185 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 SLCO4A1Q96BD0 722 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 UHRF1Q96T88 793 aaPredicted RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 NIPSNAP1Q9BPW8 284 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 PSD2Q9BQI7 771 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 AMBRA1Q9C0C7 1298 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 ACSS1Q9NUB1 689 aaPredicted RBP16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 NUP98P52948 1817 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 LAMA4Q16363 1823 aa16.09■□□□□ 0.17
PTP4A1-201ENST00000370651 NPIPA5A0A0B4J1W7 369 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 NPIPA2E9PIF3 369 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 NPIPA7E9PJI5 369 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 NPIPA3F8WFD2 350 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 NPC1O15118 1278 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 KNG1P01042 644 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 NPIPA8P0DM63 369 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 ZNF546Q86UE3 836 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 SLC7A6Q92536 515 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 PRRT1Q99946 306 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 RPS10P5Q9NQ39 176 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 QPCTLQ9NXS2 382 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 COPS3Q9UNS2 423 aa16.08■□□□□ 0.17
PTP4A1-201ENST00000370651 GAPDHSO14556 408 aaPredicted RBP16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 POLR1CO15160 346 aaPredicted RBP16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 SRPX2O60687 465 aaPredicted RBP16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 CSO75390 466 aaKnown RBP16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 TRAPPC6AO75865 159 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 IFNA17P01571 189 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 HEXBP07686 556 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 PSMB1P20618 241 aaKnown RBP16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 CSNK1DP48730 415 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 FGL2Q14314 439 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 PPA1Q15181 289 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 FCN2Q15485 313 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 ALKAL2Q6UX46 152 aa16.08■□□□□ 0.16
PTP4A1-201ENST00000370651 L3MBTL4Q8NA19 623 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms