RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 TRIM3O75382 744 aaPredicted RBP13.76□□□□□ -0.21
LMO4-201ENST00000370542 TBX6O95947 436 aaPredicted RBP13.76□□□□□ -0.21
LMO4-201ENST00000370542 YES1P07947 543 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 SP1P08047 785 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 ITGA2P17301 1181 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 M6PRP20645 277 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 AGAP20933 346 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 NR4A1P22736 598 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 GGT5P36269 586 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 MASP1P48740 699 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 BTG2P78543 158 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 KIAA0040Q15053 153 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 LRIF1Q5T3J3 769 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 SPINK14Q6IE38 97 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 OR2T5Q6IEZ7 315 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 ENPP6Q6UWR7 440 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 SLCO4C1Q6ZQN7 724 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 VASH1Q7L8A9 365 aaPredicted RBP13.76□□□□□ -0.21
LMO4-201ENST00000370542 SLC46A3Q7Z3Q1 461 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 ADAMTSL2Q86TH1 951 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 P3H2Q8IVL5 708 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 DEPDC4Q8N2C3 294 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 HORMAD2Q8N7B1 307 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 OR6F1Q8NGZ6 308 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 OR2T29Q8NH02 315 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 SGCDQ92629 289 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 NCLNQ969V3 563 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 PTCHD1Q96NR3 888 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 NSUN5Q96P11 429 aaKnown RBP13.76□□□□□ -0.21
LMO4-201ENST00000370542 SPATA9Q9BWV2 254 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 GON7Q9BXV9 100 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 HES7Q9BYE0 225 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 RBCK1Q9BYM8 510 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 DPY30Q9C005 99 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 PITHD1Q9GZP4 211 aaPredicted RBP13.76□□□□□ -0.21
LMO4-201ENST00000370542 RIBC2Q9H4K1 309 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 KLHL31Q9H511 634 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 NT5DC2Q9H857 520 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 PRDM9Q9NQV7 894 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 ENOPH1Q9UHY7 261 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 DYRK1BQ9Y463 629 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 TIMM22Q9Y584 194 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 PTGDR2Q9Y5Y4 395 aa13.76□□□□□ -0.21
LMO4-201ENST00000370542 ANKHD1Q8IWZ3 2542 aaKnown RBP13.76□□□□□ -0.21
LMO4-201ENST00000370542 TRGV8A0A0C4DH27 118 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 C9JVG2 144 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 XPNPEP2O43895 674 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 SLC19A2O60779 497 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 B4GALT2O60909 372 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 FADS2O95864 444 aaKnown RBP13.75□□□□□ -0.21
LMO4-201ENST00000370542 C1GALT1C1LP0DN25 315 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 RNH1P13489 461 aaKnown RBP13.75□□□□□ -0.21
LMO4-201ENST00000370542 CD46P15529 392 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 RCVRNP35243 200 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 HNF4AP41235 474 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 MAP2K4P45985 399 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 HTR3AP46098 478 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 GPR143P51810 404 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 MLF1P58340 268 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 TAS2R50P59544 299 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 SRSF11Q05519 484 aaKnown RBP13.75□□□□□ -0.21
LMO4-201ENST00000370542 RBPJQ06330 500 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 PIGFQ07326 219 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 CSTF3Q12996 717 aaKnown RBP13.75□□□□□ -0.21
LMO4-201ENST00000370542 SLC13A2Q13183 592 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 CDKL4Q5MAI5 379 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 ZNF468Q5VIY5 522 aaPredicted RBP13.75□□□□□ -0.21
LMO4-201ENST00000370542 SLC25A25Q6KCM7 469 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 RPTNQ6XPR3 784 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 GDPGP1Q6ZNW5 385 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 Q6ZSR9 355 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 TMPRSS11BQ86T26 416 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 ZDHHC21Q8IVQ6 265 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 PEX5LQ8IYB4 626 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 CA13Q8N1Q1 262 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 PARP16Q8N5Y8 322 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 TMEM178AQ8NBL3 297 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 APCDD1LQ8NCL9 501 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 TTLQ8NG68 377 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 CNIH3Q8TBE1 160 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 METTL6Q8TCB7 284 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 GTF2H4Q92759 462 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 ITCHQ96J02 903 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 CEP19Q96LK0 163 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 COL21A1Q96P44 957 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 CDCP1Q9H5V8 836 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 RUBCNLQ9H714 662 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 GPRC5BQ9NZH0 403 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 SLAMF8Q9P0V8 285 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 MMACHCQ9Y4U1 282 aa13.75□□□□□ -0.21
LMO4-201ENST00000370542 LRIT2A6NDA9 550 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 NPEPPSL1A6NEC2 478 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 E9PQ18 207 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 CCL21O00585 134 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 ARHGEF9O43307 516 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 SERPIND1P05546 499 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 PRPS2P11908 318 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 MAPK1P28482 360 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 RRM2P31350 389 aa13.74□□□□□ -0.21
LMO4-201ENST00000370542 FMO3P31513 532 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms