RNA–Protein interactions for RNA: ENST00000370399.6

TGFBR3-202, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TGFBR3, Length 4,550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-202ENST00000370399 PUM1Q14671 1186 aaKnown RBP eCLIP6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 SEC23BQ15437 767 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 TMEM44Q2T9K0 475 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 ACSM5Q6NUN0 579 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 ASB18Q6ZVZ8 466 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 TRIM36Q9NQ86 728 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 C14orf105Q9NVL8 296 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 UCKL1Q9NWZ5 548 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 EXO1Q9UQ84 846 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 PATJQ8NI35 1801 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 IGKV1-8A0A0C4DH67 115 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 OR2A25A4D2G3 310 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 ZNF749O43361 778 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 TSC22D2O75157 780 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 DNAJB6O75190 326 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 KRT33AO76009 404 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 CSF2P04141 144 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 F13BP05160 661 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 GIMD1P0DJR0 217 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 ZNF823P16415 610 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 NUDT1P36639 197 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 VASPP50552 380 aaPredicted RBP6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 PDE7AQ13946 482 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 BTBD16Q32M84 506 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 NIPAL1Q6NVV3 410 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 MED25Q71SY5 747 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 ZNF367Q7RTV3 350 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 SLC22A16Q86VW1 577 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 YIPF7Q8N8F6 280 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 OR13F1Q8NGS4 319 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 OR2I1PQ8NGU4 316 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 RHBDD1Q8TEB9 315 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 DIO2Q92813 273 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 EDAQ92838 391 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 TSLPQ969D9 159 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 WDR34Q96EX3 536 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 TNFRSF13CQ96RJ3 184 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 GFM1Q96RP9 751 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 THSD1Q9NS62 852 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 GPATCH2Q9NW75 528 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 SEC14L4Q9UDX3 406 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 ENPP5Q9UJA9 477 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 NDRG4Q9ULP0 352 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 PAIP2BQ9ULR5 123 aaKnown RBP6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 CAB39Q9Y376 341 aaPredicted RBP6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 NOTCH4Q99466 2003 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 COL4A6Q14031 1691 aa6.63□□□□□ -1.35
TGFBR3-202ENST00000370399 NBASA2RRP1 2371 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 A0A075B6Q4 140 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 SH3D21A4FU49 640 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 PRKYO43930 277 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 CAPNS1P04632 268 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 SLC35E2P0CK97 266 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 LTBRP36941 435 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 MRPL19P49406 292 aaKnown RBP6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 RGS6P49758 472 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 CCR5P51681 352 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 GPR143P51810 404 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 CXCR4P61073 352 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 LSM11P83369 360 aaKnown RBP eCLIP6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 TRIM61Q5EBN2 209 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 PLET1Q6UQ28 207 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 GDF7Q7Z4P5 450 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 KIAA1958Q8N8K9 716 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 GPR32P1Q8NGA4 272 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 MSLNLQ96KJ4 702 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 ZNF559Q9BR84 538 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 SLC38A1Q9H2H9 487 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 RNF167Q9H6Y7 350 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 FBXO34Q9NWN3 711 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 IGHV1OR15-9A0A0B4J2B8 117 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 IQCMA0A1B0GVH7 501 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 A0A1B0GWA3 101 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 LRRN3E7EW58 273 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 PRODHO43272 600 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 CTNSO60931 367 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 CBFA2T3O75081 653 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 TRAPPC6AO75865 159 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 SDC2P34741 201 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 LIPAP38571 399 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 STAT5AP42229 794 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 TSFMP43897 325 aaKnown RBP6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 TUBA1BP68363 451 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 SLC35A2P78381 396 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 ANKDD1AQ495B1 522 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 PAQR6Q6TCH4 344 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 TUBA1AQ71U36 451 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 CAMKMTQ7Z624 323 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 ZNF595Q8IYB9 648 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 TRUB1Q8WWH5 349 aaKnown RBP6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 NR4A3Q92570 626 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 TTYH2Q9BSA4 534 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 S1PR5Q9H228 398 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 LRRN3Q9H3W5 708 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 FOLH1BQ9HBA9 442 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 SIDT1Q9NXL6 827 aaKnown RBP6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 PSORS1C1Q9UIG5 152 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 RNF215Q9Y6U7 377 aa6.62□□□□□ -1.35
TGFBR3-202ENST00000370399 IGHV5-51A0A0C4DH38 117 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms