RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 BCL2L10Q9HD36 194 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 NDE1Q9NXR1 346 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 OSGIN2Q9Y236 505 aa12.52□□□□□ -0.41
SSR4-202ENST00000370085 FASNP49327 2511 aaKnown RBP12.52□□□□□ -0.41
SSR4-202ENST00000370085 NCKAP5O14513 1909 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 PRORSD1PA6NEY8 169 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 FIGNL2A6NMB9 653 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 NPIPA2E9PIF3 369 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 NPIPA3F8WFD2 350 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 SERPINB7O75635 380 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 CYP7B1O75881 506 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 C1QCP02747 245 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 TPOP07202 933 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 THBS1P07996 1170 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 CELA3AP09093 270 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 NID1P14543 1247 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 ETS2P15036 469 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 PGCP20142 388 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 EIF1P41567 113 aaKnown RBP12.51□□□□□ -0.41
SSR4-202ENST00000370085 SLC6A8P48029 635 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 PER3P56645 1201 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 KCNJ10P78508 379 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 EIF2S3LQ2VIR3 472 aaKnown RBP12.51□□□□□ -0.41
SSR4-202ENST00000370085 EIPR1Q53HC9 387 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 WIPI1Q5MNZ9 446 aaPredicted RBP12.51□□□□□ -0.41
SSR4-202ENST00000370085 RAET1LQ5VY80 246 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 MTFR2Q6P444 385 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 ERICH5Q6P6B1 374 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 HACD2Q6Y1H2 254 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 YRDCQ86U90 279 aaKnown RBP12.51□□□□□ -0.41
SSR4-202ENST00000370085 TREML1Q86YW5 311 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 OR52P1PQ8NH57 321 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 OR5W2Q8NH69 310 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 OR10A6Q8NH74 314 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 NFKBIDQ8NI38 313 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 FAM57AQ8TBR7 257 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 ABTB1Q969K4 478 aaPredicted RBP12.51□□□□□ -0.41
SSR4-202ENST00000370085 MAL2Q969L2 176 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 ZBTB8AQ96BR9 441 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 LAT2Q9GZY6 243 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 SLC6A15Q9H2J7 730 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 TAGLN3Q9UI15 199 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 SLC13A4Q9UKG4 626 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 PRDM4Q9UKN5 801 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 CARD8Q9Y2G2 431 aa12.51□□□□□ -0.41
SSR4-202ENST00000370085 TRGV8A0A0C4DH27 118 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 PRAMEF27A3QJZ7 478 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 GMFGO60234 142 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 PGM3O95394 542 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 STSP08842 583 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 HOXD4P09016 255 aaPredicted RBP12.5□□□□□ -0.41
SSR4-202ENST00000370085 NUDT7P0C024 238 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 UBTFL6P0CB48 400 aaPredicted RBP12.5□□□□□ -0.41
SSR4-202ENST00000370085 ESRRAP11474 423 aaPredicted RBP12.5□□□□□ -0.41
SSR4-202ENST00000370085 GABRA1P14867 456 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 ZNF17P17021 662 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 ME2P23368 584 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 CHMP24386 653 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 MXRA7P84157 204 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 HSF1Q00613 529 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 ZNF117Q03924 483 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 CD226Q15762 336 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 NHSL2Q5HYW2 709 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 ZNF311Q5JNZ3 666 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 FAM91A1Q658Y4 838 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 Q6ZPB1 254 aaPredicted RBP12.5□□□□□ -0.41
SSR4-202ENST00000370085 TMEM234Q8WY98 164 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 SLC39A3Q9BRY0 314 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 RTN4RQ9BZR6 473 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 TP63Q9H3D4 680 aaPredicted RBP12.5□□□□□ -0.41
SSR4-202ENST00000370085 IKZF5Q9H5V7 419 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 RUBCNLQ9H714 662 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 EXOSC3Q9NQT5 275 aaKnown RBP12.5□□□□□ -0.41
SSR4-202ENST00000370085 VDAC3Q9Y277 283 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 ZNF835Q9Y2P0 537 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 LIPGQ9Y5X9 500 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 DSPPQ9NZW4 1301 aa12.5□□□□□ -0.41
SSR4-202ENST00000370085 UBR5O95071 2799 aaPredicted RBP12.5□□□□□ -0.41
SSR4-202ENST00000370085 FXYD1O00168 92 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 DNAJA2O60884 412 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 WDR1O75083 606 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 ZIC2O95409 532 aaPredicted RBP12.49□□□□□ -0.41
SSR4-202ENST00000370085 RPS4Y1P22090 263 aaKnown RBP12.49□□□□□ -0.41
SSR4-202ENST00000370085 PTGER4P35408 488 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 UQCRFS1P47985 274 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 EEFSECP57772 596 aaKnown RBP12.49□□□□□ -0.41
SSR4-202ENST00000370085 KRT72Q14CN4 511 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 MAPK14Q16539 360 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 C4orf17Q53FE4 359 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 RABL3Q5HYI8 236 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 RPS26P11Q5JNZ5 115 aaPredicted RBP12.49□□□□□ -0.41
SSR4-202ENST00000370085 RNF220Q5VTB9 566 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 OLIG3Q7RTU3 272 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 NET1Q7Z628 596 aaPredicted RBP12.49□□□□□ -0.41
SSR4-202ENST00000370085 PATL1Q86TB9 770 aaKnown RBP12.49□□□□□ -0.41
SSR4-202ENST00000370085 CD163Q86VB7 1156 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 TNIP2Q8NFZ5 429 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 ZNF563Q8TA94 476 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 SLC26A7Q8TE54 656 aa12.49□□□□□ -0.41
SSR4-202ENST00000370085 RASSF5Q8WWW0 418 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms