RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 GDF9O60383 454 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 NPIPA8P0DM63 369 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 NR2F1P10589 423 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 NT5EP21589 574 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 SOX6P35712 828 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 BUD31P41223 144 aaPredicted RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 ARL4DP49703 201 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 BTG2P78543 158 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 TMEM65Q6PI78 240 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 DGAT2L6Q6ZPD8 337 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 ABHD13Q7L211 337 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 MEX3DQ86XN8 651 aaKnown RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 TMEM105Q8N8V8 129 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 OR7G2Q8NG99 324 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 GOT1L1Q8NHS2 421 aaPredicted RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 ZFAND1Q8TCF1 268 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 ELF4Q99607 663 aaPredicted RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 SLC30A2Q9BRI3 323 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.91□□□□□ -0.82
TPM3-212ENST00000368533 ZMAT5Q9UDW3 170 aaKnown RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 EFCAB10A6NFE3 127 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 ENTPD6O75354 484 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 FCER2P06734 321 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 CSNK2A2P19784 350 aaPredicted RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 MYL9P24844 172 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 TGM3Q08188 693 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 KRR1Q13601 381 aaKnown RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 GRM7Q14831 915 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 SHBQ15464 509 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 CRB2Q5IJ48 1285 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 LAMTOR1Q6IAA8 161 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 GUSBP11Q6P575 273 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 TTLL10Q6ZVT0 673 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 TMPRSS9Q7Z410 1059 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 LAX1Q8IWV1 398 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 MAML2Q8IZL2 1156 aaPredicted RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 ZBTB44Q8NCP5 570 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 SRFBP1Q8NEF9 429 aaKnown RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 DNASE2BQ8WZ79 361 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 TM4SF19Q96DZ7 209 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 MTERF3Q96E29 417 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 PITHD1Q9GZP4 211 aaPredicted RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 POLR2J3Q9H1A7 115 aaKnown RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 THSD1Q9NS62 852 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 KCMF1Q9P0J7 381 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 ENTPD2Q9Y5L3 495 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 KNTC1P50748 2209 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 CCDC182A6NF36 153 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 HRKO00198 91 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 TNFSF14O43557 240 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 NTN1O95631 604 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 CSF2RBP32927 897 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 TNFRSF17Q02223 184 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 BTN1A1Q13410 526 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 PIN1Q13526 163 aaPredicted RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 PUM1Q14671 1186 aaKnown RBP eCLIP9.91□□□□□ -0.821e-11■■□□□ 13.1
TPM3-212ENST00000368533 HLA-BQ31612 363 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 C1orf210Q8IVY1 113 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 EID2Q8N6I1 236 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 IQCF1Q8N6M8 205 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 TCEANCQ8N8B7 351 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 NUP43Q8NFH3 380 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 NLGN4YQ8NFZ3 816 aaPredicted RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 FBXW5Q969U6 566 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 DUSP15Q9H1R2 295 aaPredicted RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 GAREM1Q9H706 876 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 ZC4H2Q9NQZ6 224 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 PLCXD1Q9NUJ7 323 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 TVP23BQ9NYZ1 205 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 ENOPH1Q9UHY7 261 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 CES1P1Q9UKY3 287 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 CLCA3PQ9Y6N3 262 aa9.91□□□□□ -0.82
TPM3-212ENST00000368533 MN1Q10571 1320 aaPredicted RBP9.91□□□□□ -0.82
TPM3-212ENST00000368533 TMEM150CB9EJG8 249 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 DPM1O60762 260 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 MAOAP21397 527 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 CFL1P23528 166 aaKnown RBP9.9□□□□□ -0.82
TPM3-212ENST00000368533 SOX3P41225 446 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 FASLGP48023 281 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 PGDP52209 483 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 UGT2B15P54855 530 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 CCDC190Q86UF4 302 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 COMTD1Q86VU5 262 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 SLC16A11Q8NCK7 471 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 CCDC74AQ96AQ1 378 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 TRAF4Q9BUZ4 470 aaPredicted RBP9.9□□□□□ -0.82
TPM3-212ENST00000368533 C11orf54Q9H0W9 315 aaPredicted RBP9.9□□□□□ -0.82
TPM3-212ENST00000368533 CDCP1Q9H5V8 836 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 ANKHQ9HCJ1 492 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 ADAM29Q9UKF5 820 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 MKLN1Q9UL63 735 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 LINC01387J3KSC0 135 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 M0R3H8 397 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 FFAR1O14842 300 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 CHST10O43529 356 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 APOL3O95236 402 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 H1F0P07305 194 aaKnown RBP9.9□□□□□ -0.82
TPM3-212ENST00000368533 CT62P0C5K7 136 aa9.9□□□□□ -0.82
TPM3-212ENST00000368533 GIMD1P0DJR0 217 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms