RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 YRDCQ86U90 279 aaKnown RBP12.65□□□□□ -0.38
TPM3-211ENST00000368531 MISPQ8IVT2 679 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 CLIP4Q8N3C7 705 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 FAM109AQ8N4B1 249 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 SMYD1Q8NB12 490 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 SLC26A7Q8TE54 656 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 FIG4Q92562 907 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 NR4A3Q92570 626 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 LDAHQ9H6V9 325 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 ZNF703Q9H7S9 590 aaPredicted RBP12.65□□□□□ -0.38
TPM3-211ENST00000368531 SEC14L3Q9UDX4 400 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 EGFL7Q9UHF1 273 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 RPH3AQ9Y2J0 694 aaPredicted RBP12.65□□□□□ -0.38
TPM3-211ENST00000368531 IFT52Q9Y366 437 aa12.65□□□□□ -0.38
TPM3-211ENST00000368531 GPC6Q9Y625 555 aaPredicted RBP12.65□□□□□ -0.38
TPM3-211ENST00000368531 EPG5Q9HCE0 2579 aa12.65□□□□□ -0.39
TPM3-211ENST00000368531 GYG2O15488 501 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 TPST1O60507 370 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 SERPINB7O75635 380 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 DPP4P27487 766 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 RYKP34925 604 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 PGM1P36871 562 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 PCBP3P57721 371 aaKnown RBP12.64□□□□□ -0.39
TPM3-211ENST00000368531 HSF1Q00613 529 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 DMTNQ08495 405 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 HYAL4Q2M3T9 481 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 LIN52Q52LA3 116 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 LRRC23Q53EV4 343 aaPredicted RBP12.64□□□□□ -0.39
TPM3-211ENST00000368531 EIPR1Q53HC9 387 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 SAMD4BQ5PRF9 694 aaKnown RBP12.64□□□□□ -0.39
TPM3-211ENST00000368531 AP1ARQ63HQ0 302 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 ARSKQ6UWY0 536 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 ARMC8Q8IUR7 673 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 FADS6Q8N9I5 356 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 FAM83FQ8NEG4 500 aaPredicted RBP12.64□□□□□ -0.39
TPM3-211ENST00000368531 OR5M1Q8NGP8 315 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 OR14L1PQ8NHC6 308 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 PMM1Q92871 262 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 SLC7A6OSQ96CW6 309 aaPredicted RBP12.64□□□□□ -0.39
TPM3-211ENST00000368531 THTPAQ9BU02 230 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 SPATA5L1Q9BVQ7 753 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 LAT2Q9GZY6 243 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 SLC6A15Q9H2J7 730 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 PTGES2Q9H7Z7 377 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 VDAC3Q9Y277 283 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 SLC35A3Q9Y2D2 325 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 LIPGQ9Y5X9 500 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 ITPR1Q14643 2758 aa12.64□□□□□ -0.39
TPM3-211ENST00000368531 IGLV3-32A0A0A0MS00 114 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 EBAG9O00559 213 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 CXCR6O00574 342 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 FRS3O43559 492 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 PDE5AO76074 875 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 MFN2O95140 757 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 THBS1P07996 1170 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 GKN3PP0CG01 181 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 HK1P19367 917 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 ENDOUP21128 410 aaKnown RBP12.63□□□□□ -0.39
TPM3-211ENST00000368531 MSX1P28360 303 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 ADH7P40394 386 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 P2RX1P51575 399 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 EEF1A1P68104 462 aaKnown RBP12.63□□□□□ -0.39
TPM3-211ENST00000368531 FOXK1P85037 733 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 TLE1Q04724 770 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 SKP2Q13309 424 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 CEACAM7Q14002 265 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 VEZF1Q14119 521 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 GLIPR1L2Q4G1C9 344 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 CMPK2Q5EBM0 449 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 ZNF324BQ6AW86 544 aaPredicted RBP12.63□□□□□ -0.39
TPM3-211ENST00000368531 PATL1Q86TB9 770 aaKnown RBP12.63□□□□□ -0.39
TPM3-211ENST00000368531 SPPL2CQ8IUH8 684 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 SIAH3Q8IW03 269 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 TNIP2Q8NFZ5 429 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 TAMM41Q96BW9 452 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 CLPTM1LQ96KA5 538 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 RSPO3Q9BXY4 272 aaPredicted RBP12.63□□□□□ -0.39
TPM3-211ENST00000368531 UBQLN3Q9H347 655 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 TAS2R10Q9NYW0 307 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 SLC13A4Q9UKG4 626 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 ICAM5Q9UMF0 924 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 SLC6A5Q9Y345 797 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 CHST2Q9Y4C5 530 aa12.63□□□□□ -0.39
TPM3-211ENST00000368531 NBEAQ8NFP9 2946 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 ATRXP46100 2492 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 TRGV5A0A0B4J1U4 118 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 CDHR4A6H8M9 788 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 SHISA8B8ZZ34 492 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 FAM47E-STBD1D6RA91 191 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 AP3D1O14617 1153 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 ZIC3O60481 467 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 EIF4E2O60573 245 aaKnown RBP12.62□□□□□ -0.39
TPM3-211ENST00000368531 DNAJA2O60884 412 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 GMNNO75496 209 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 HTR1EP28566 365 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 SRD5A2P31213 254 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 KDELR2P33947 212 aa12.62□□□□□ -0.39
TPM3-211ENST00000368531 ZNF41P51814 821 aaPredicted RBP12.62□□□□□ -0.39
TPM3-211ENST00000368531 DSCR4P56555 118 aaPredicted RBP12.62□□□□□ -0.39
TPM3-211ENST00000368531 PLAURQ03405 335 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms