RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 CDS1Q92903 461 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 SLC35A4Q96G79 324 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 MBOAT4Q96T53 435 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 RBM4BQ9BQ04 359 aaKnown RBP9.16□□□□□ -0.94
TPM3-210ENST00000368530 RBM4Q9BWF3 364 aaKnown RBP9.16□□□□□ -0.94
TPM3-210ENST00000368530 RSPO3Q9BXY4 272 aaPredicted RBP9.16□□□□□ -0.94
TPM3-210ENST00000368530 AMBRA1Q9C0C7 1298 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 VN1R1Q9GZP7 353 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 TOR3AQ9H497 397 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 PRDM9Q9NQV7 894 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 PRTFDC1Q9NRG1 225 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 MAT2BQ9NZL9 334 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 NDUFAF4Q9P032 175 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 PDP1Q9P0J1 537 aaPredicted RBP9.16□□□□□ -0.94
TPM3-210ENST00000368530 RHCGQ9UBD6 479 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 SCOCQ9UIL1 159 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 MKL2Q9ULH7 1088 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 PCDHGB6Q9Y5F9 930 aa9.16□□□□□ -0.94
TPM3-210ENST00000368530 IGHV3-20A0A0C4DH32 117 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 MITFO75030 526 aaPredicted RBP9.15□□□□□ -0.94
TPM3-210ENST00000368530 SERPINB7O75635 380 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 SEC24DO94855 1032 aaPredicted RBP9.15□□□□□ -0.94
TPM3-210ENST00000368530 H6PDO95479 791 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 HPRP00739 348 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 IFNW1P05000 195 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 ATP1B1P05026 303 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 AGAP20933 346 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 MAOAP21397 527 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 FPR1P21462 350 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 MAGEA8P43361 318 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 MAN2A2P49641 1150 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 ARHGDIAP52565 204 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 CDH12P55289 794 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 BTG2P78543 158 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 TXNL4AP83876 142 aaKnown RBP9.15□□□□□ -0.94
TPM3-210ENST00000368530 PPP2R2BQ00005 443 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 MYBPC1Q00872 1141 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 STX4Q12846 297 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 GANABQ14697 944 aaKnown RBP9.15□□□□□ -0.94
TPM3-210ENST00000368530 PRICKLE4Q2TBC4 344 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 SLC36A3Q495N2 470 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 ABHD17BQ5VST6 288 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 PLAG1Q6DJT9 500 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 KRT80Q6KB66 452 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 CDC73Q6P1J9 531 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 MTFR2Q6P444 385 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 LANCL3Q6ZV70 420 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 KRT73Q86Y46 540 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 RBM45Q8IUH3 476 aaKnown RBP9.15□□□□□ -0.94
TPM3-210ENST00000368530 SLC16A11Q8NCK7 471 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 MDS2Q8NDY4 140 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 OR52J3Q8NH60 311 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 THAP3Q8WTV1 239 aaPredicted RBP9.15□□□□□ -0.94
TPM3-210ENST00000368530 PROX1Q92786 737 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 SIGLEC12Q96PQ1 595 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 ZNF300Q96RE9 604 aaPredicted RBP9.15□□□□□ -0.94
TPM3-210ENST00000368530 OSBPL10Q9BXB5 764 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 HES7Q9BYE0 225 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 ANKRD60Q9BZ19 345 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 QRSL1Q9H0R6 528 aaKnown RBP9.15□□□□□ -0.94
TPM3-210ENST00000368530 EXD2Q9NVH0 621 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 USE1Q9NZ43 259 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 KIF17Q9P2E2 1029 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 TINAGQ9UJW2 476 aa9.15□□□□□ -0.94
TPM3-210ENST00000368530 MRPS33Q9Y291 106 aaKnown RBP9.15□□□□□ -0.94
TPM3-210ENST00000368530 NCOA6Q14686 2063 aaPredicted RBP9.15□□□□□ -0.94
TPM3-210ENST00000368530 M0R3H8 397 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 TNFRSF11BO00300 401 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 MAN1A2O60476 641 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 FESP07332 822 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 SLC35E2P0CK97 266 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 COX6B1P14854 86 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 ITGA2P17301 1181 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 FUT4P22083 530 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 IGFBP5P24593 272 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 CD96P40200 585 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 XCR1P46094 333 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 KCNJ5P48544 419 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 ADARB1P78563 741 aaKnown RBP9.15□□□□□ -0.95
TPM3-210ENST00000368530 HPCAP84074 193 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 CHRNEQ04844 493 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 MGAT2Q10469 447 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 ZNF155Q12901 538 aaPredicted RBP9.15□□□□□ -0.95
TPM3-210ENST00000368530 TUBA3CQ13748 450 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 GNA13Q14344 377 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 DUSP5Q16690 384 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 ZNF766Q5HY98 468 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 ACER2Q5QJU3 275 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 CCNJQ5T5M9 372 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 MFSD4BQ5TF39 518 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 FCRLBQ6BAA4 426 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 NIPAL1Q6NVV3 410 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 TUBA3EQ6PEY2 450 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 DEF8Q6ZN54 512 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 CPEB2Q7Z5Q1 589 aaKnown RBP9.15□□□□□ -0.95
TPM3-210ENST00000368530 COMTD1Q86VU5 262 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 SIAH3Q8IW03 269 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 METTL25Q8N6Q8 603 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 OR52R1Q8NGF1 315 aa9.15□□□□□ -0.95
TPM3-210ENST00000368530 SCMH1Q96GD3 660 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms