RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 TEX10Q9NXF1 929 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-207ENST00000368226 SOBPA7XYQ1 873 aa12.1□□□□□ -0.47
PTPRK-207ENST00000368226 LIPCP11150 499 aa12.1□□□□□ -0.47
PTPRK-207ENST00000368226 POU3F1Q03052 451 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-207ENST00000368226 GPR18Q14330 331 aa12.1□□□□□ -0.47
PTPRK-207ENST00000368226 PPA1Q15181 289 aa12.1□□□□□ -0.47
PTPRK-207ENST00000368226 OLIG3Q7RTU3 272 aa12.1□□□□□ -0.47
PTPRK-207ENST00000368226 ADAMTS16Q8TE57 1224 aa12.1□□□□□ -0.47
PTPRK-207ENST00000368226 TBC1D20Q96BZ9 403 aa12.1□□□□□ -0.47
PTPRK-207ENST00000368226 ZNF300Q96RE9 604 aaPredicted RBP12.1□□□□□ -0.47
PTPRK-207ENST00000368226 NTMT1Q9BV86 223 aa12.1□□□□□ -0.47
PTPRK-207ENST00000368226 PAPOLGQ9BWT3 736 aaKnown RBP12.1□□□□□ -0.47
PTPRK-207ENST00000368226 PBX4Q9BYU1 374 aa12.1□□□□□ -0.47
PTPRK-207ENST00000368226 RDH8Q9NYR8 311 aa12.1□□□□□ -0.47
PTPRK-207ENST00000368226 PEX14O75381 377 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 HOXB9P17482 250 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-207ENST00000368226 NKX3-2P78367 333 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 OR1Q1Q15612 314 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 VASNQ6EMK4 673 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 FAM111BQ6SJ93 734 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 FRMD1Q8N878 549 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 ZNF740Q8NDX6 193 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 SLC29A1Q99808 456 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 F5H0A9 414 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-207ENST00000368226 K7ESM1 405 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 M0R233 179 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 PHYHO14832 338 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 RAC2P15153 192 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 NTRK2Q16620 822 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 PODNL1Q6PEZ8 512 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 UNQ6126/PRO20091Q6UXV3 157 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 RABEPKQ7Z6M1 372 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 RBM12BQ8IXT5 1001 aaKnown RBP12.09□□□□□ -0.47
PTPRK-207ENST00000368226 OR5H2Q8NGV7 314 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 DNAJB11Q9UBS4 358 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 ALDOCP09972 364 aaKnown RBP12.09□□□□□ -0.47
PTPRK-207ENST00000368226 SNTB2Q13425 540 aaKnown RBP12.09□□□□□ -0.47
PTPRK-207ENST00000368226 EFR3AQ14156 821 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 TMIGD2Q96BF3 282 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 ATOH8Q96SQ7 321 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 EGLN3Q9H6Z9 239 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 SAGE1Q9NXZ1 904 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 HIF3AQ9Y2N7 669 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 MPPED1O15442 326 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 RP2O75695 350 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 BMP4P12644 408 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 SLC6A8P48029 635 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 ZNF45Q02386 682 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 CCSMST1Q4G0I0 132 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 DCAF12Q5T6F0 453 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 CPZQ66K79 652 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 ZNF845Q96IR2 970 aaPredicted RBP12.09□□□□□ -0.47
PTPRK-207ENST00000368226 FOXQ1Q9C009 403 aa12.09□□□□□ -0.47
PTPRK-207ENST00000368226 FBP2O00757 339 aa12.08□□□□□ -0.47
PTPRK-207ENST00000368226 GOSR2O14653 212 aa12.08□□□□□ -0.47
PTPRK-207ENST00000368226 HMGB3O15347 200 aaKnown RBP12.08□□□□□ -0.47
PTPRK-207ENST00000368226 GCAP28676 217 aa12.08□□□□□ -0.47
PTPRK-207ENST00000368226 S100A2P29034 98 aa12.08□□□□□ -0.47
PTPRK-207ENST00000368226 IDUAP35475 653 aa12.08□□□□□ -0.47
PTPRK-207ENST00000368226 CSNK1DP48730 415 aa12.08□□□□□ -0.47
PTPRK-207ENST00000368226 LEXMQ3ZCV2 418 aa12.08□□□□□ -0.47
PTPRK-207ENST00000368226 ZC3H10Q96K80 434 aaKnown RBP12.08□□□□□ -0.47
PTPRK-207ENST00000368226 TWSG1Q9GZX9 223 aa12.08□□□□□ -0.47
PTPRK-207ENST00000368226 SAP130Q9H0E3 1048 aa12.08□□□□□ -0.47
PTPRK-207ENST00000368226 TMEM9Q9P0T7 183 aa12.08□□□□□ -0.47
PTPRK-207ENST00000368226 TMEM181Q9P2C4 612 aa12.08□□□□□ -0.47
PTPRK-207ENST00000368226 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-207ENST00000368226 NPR2P20594 1047 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 MGAT3Q09327 533 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 ABHD12BQ7Z5M8 362 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-207ENST00000368226 MARVELD2Q8N4S9 558 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 PDXPQ96GD0 296 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 MED20Q9H944 212 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 INIPQ9NRY2 104 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 GPR45Q9Y5Y3 372 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 IMPA1P29218 277 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 CRABP1P29762 137 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 HLCSP50747 726 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 PRDX1Q06830 199 aaKnown RBP12.08□□□□□ -0.48
PTPRK-207ENST00000368226 LTC4SQ16873 150 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 SLC5A12Q1EHB4 618 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 COL28A1Q2UY09 1125 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 COQ5Q5HYK3 327 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 RSPO2Q6UXX9 243 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-207ENST00000368226 Q6ZPB1 254 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-207ENST00000368226 EDAQ92838 391 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 C4orf36Q96KX1 117 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 KLHL15Q96M94 604 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 TREX2Q9BQ50 279 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-207ENST00000368226 GMPR2Q9P2T1 348 aaKnown RBP12.08□□□□□ -0.48
PTPRK-207ENST00000368226 IGHV3-20A0A0C4DH32 117 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 AGAP5A6NIR3 686 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 OR7A17O14581 309 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 UGT2B10P36537 528 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 CCL11P51671 97 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 PCGF3Q3KNV8 242 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 OR2T11Q8NH01 316 aa12.08□□□□□ -0.48
PTPRK-207ENST00000368226 SENP5Q96HI0 755 aaPredicted RBP12.08□□□□□ -0.48
PTPRK-207ENST00000368226 MBNL1Q9NR56 388 aaKnown RBP12.08□□□□□ -0.48
PTPRK-207ENST00000368226 DCAF13Q9NV06 445 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms