RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 ETFAP13804 333 aa13.25□□□□□ -0.29
SF3B5-201ENST00000367569 LHX2P50458 406 aa13.25□□□□□ -0.29
SF3B5-201ENST00000367569 AGFG1P52594 562 aaKnown RBP13.25□□□□□ -0.29
SF3B5-201ENST00000367569 C17orf67Q0P5P2 114 aa13.25□□□□□ -0.29
SF3B5-201ENST00000367569 SYPL1Q16563 259 aa13.25□□□□□ -0.29
SF3B5-201ENST00000367569 PPP4R4Q6NUP7 873 aa13.25□□□□□ -0.29
SF3B5-201ENST00000367569 GOT1L1Q8NHS2 421 aaPredicted RBP13.25□□□□□ -0.29
SF3B5-201ENST00000367569 ROPN1LQ96C74 230 aa13.25□□□□□ -0.29
SF3B5-201ENST00000367569 ITCHQ96J02 903 aa13.25□□□□□ -0.29
SF3B5-201ENST00000367569 ZNF350Q9GZX5 532 aa13.25□□□□□ -0.29
SF3B5-201ENST00000367569 PTGES2Q9H7Z7 377 aa13.25□□□□□ -0.29
SF3B5-201ENST00000367569 EXD2Q9NVH0 621 aa13.25□□□□□ -0.29
SF3B5-201ENST00000367569 MTORP42345 2549 aa13.25□□□□□ -0.29
SF3B5-201ENST00000367569 MED12LQ86YW9 2145 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 CLDN24A6NM45 220 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 NPIPB9F8W1W9 429 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 KIAA0513O60268 411 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 H6PDO95479 791 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 ACTL6AO96019 429 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 NGFRP08138 427 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 CHRM4P08173 479 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 PEPDP12955 493 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 ATP12AP54707 1039 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 CLDN18P56856 261 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 CLDN20P56880 219 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 HPCAP84074 193 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 FOXF1Q12946 379 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 RCAN2Q14206 197 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 SQLEQ14534 574 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 TESK1Q15569 626 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 TOMM34Q15785 309 aaPredicted RBP13.24□□□□□ -0.29
SF3B5-201ENST00000367569 MAPK14Q16539 360 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 ARHGAP11BQ3KRB8 267 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 NHSL2Q5HYW2 709 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 RPS26P11Q5JNZ5 115 aaPredicted RBP13.24□□□□□ -0.29
SF3B5-201ENST00000367569 PAGE3Q5JUK9 113 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 ATAD3BQ5T9A4 648 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 TYW3Q6IPR3 259 aaKnown RBP13.24□□□□□ -0.29
SF3B5-201ENST00000367569 FRRS1Q6ZNA5 592 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 CDH24Q86UP0 819 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 LIX1LQ8IVB5 337 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 TRIML2Q8N7C3 387 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 C9orf106Q8NAJ2 232 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 ZNF527Q8NB42 609 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 CHDHQ8NE62 594 aaPredicted RBP13.24□□□□□ -0.29
SF3B5-201ENST00000367569 B4GALNT2Q8NHY0 566 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 MIPOL1Q8TD10 442 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 ZFP90Q8TF47 636 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 ZNF524Q96C55 264 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 SPDL1Q96EA4 605 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 RNF145Q96MT1 663 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 PAIP1Q9H074 479 aaKnown RBP13.24□□□□□ -0.29
SF3B5-201ENST00000367569 RMND5AQ9H871 391 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 KCNJ16Q9NPI9 418 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 MED17Q9NVC6 651 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 SLAMF8Q9P0V8 285 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 ZNF337Q9Y3M9 751 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 L3MBTL1Q9Y468 752 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 WDR45Q9Y484 360 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 PCDHGB3Q9Y5G1 929 aa13.24□□□□□ -0.29
SF3B5-201ENST00000367569 IGLV3-32A0A0A0MS00 114 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 A0A1W2PQD3 144 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 CLCA1A8K7I4 914 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 STX11O75558 287 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 UGT2B17O75795 530 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 BCHEP06276 602 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 NUDT7P0C024 238 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 UBTFL6P0CB48 400 aaPredicted RBP13.23□□□□□ -0.29
SF3B5-201ENST00000367569 UBL4AP11441 157 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 GABRA1P14867 456 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 ZNF708P17019 499 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 IL11P20809 199 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 MSX1P28360 303 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 CRATP43155 626 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 ZNF41P51814 821 aaPredicted RBP13.23□□□□□ -0.29
SF3B5-201ENST00000367569 SUCLG1P53597 346 aaKnown RBP13.23□□□□□ -0.29
SF3B5-201ENST00000367569 CHRNEQ04844 493 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 GANABQ14697 944 aaKnown RBP13.23□□□□□ -0.29
SF3B5-201ENST00000367569 PLPPR5Q32ZL2 321 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 KLHL26Q53HC5 615 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 HEPHL1Q6MZM0 1159 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 AAGABQ6PD74 315 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 ENPP6Q6UWR7 440 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 MSRB3Q8IXL7 192 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 PM20D2Q8IYS1 436 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 GCNT2Q8N0V5 402 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 ARFGAP2Q8N6H7 521 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 POC1BQ8TC44 478 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 GTF2H4Q92759 462 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 ZNF845Q96IR2 970 aaPredicted RBP13.23□□□□□ -0.29
SF3B5-201ENST00000367569 ZNF385DQ9H6B1 395 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 MED4Q9NPJ6 270 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 DTNAQ9Y4J8 743 aa13.23□□□□□ -0.29
SF3B5-201ENST00000367569 DUXAA6NLW8 204 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 GTPBP1O00178 669 aaKnown RBP13.22□□□□□ -0.29
SF3B5-201ENST00000367569 HOXB9P17482 250 aaPredicted RBP13.22□□□□□ -0.29
SF3B5-201ENST00000367569 BMP5P22003 454 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 SHC1P29353 583 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 MVDP53602 400 aa13.22□□□□□ -0.29
SF3B5-201ENST00000367569 CLDN15P56746 228 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms