RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 MAGED1Q9Y5V3 778 aaPredicted RBP11.28□□□□□ -0.6
CAPN9-203ENST00000366666 DSPPQ9NZW4 1301 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 DMXL2Q8TDJ6 3036 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 TMEM200CA6NKL6 621 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 SLC1A7O00341 560 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 PEX12O00623 359 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 RAB40ALP0C0E4 278 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 MMP11P24347 488 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 RBMS1P29558 406 aaKnown RBP11.28□□□□□ -0.6
CAPN9-203ENST00000366666 IDUAP35475 653 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 CRISP3P54108 245 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 RAD23AP54725 363 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 KCNAB2Q13303 367 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 GPR68Q15743 365 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 MAPK14Q16539 360 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 CTF1Q16619 201 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 CTU2Q2VPK5 515 aaKnown RBP11.28□□□□□ -0.6
CAPN9-203ENST00000366666 ATAD3BQ5T9A4 648 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 ZCCHC12Q6PEW1 402 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 VRK2Q86Y07 508 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 HIPK1Q86Z02 1210 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 EID3Q8N140 333 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 GPR32P1Q8NGA4 272 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 HSH2DQ96JZ2 352 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 TRNT1Q96Q11 434 aaKnown RBP11.28□□□□□ -0.6
CAPN9-203ENST00000366666 SEMA4CQ9C0C4 833 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 COPS7AQ9UBW8 275 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 CHST2Q9Y4C5 530 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 EML6Q6ZMW3 1958 aa11.28□□□□□ -0.6
CAPN9-203ENST00000366666 C2orf92A0A1B0GVN3 265 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 ANKRD34BA5PLL1 514 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 DYRK3O43781 588 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 DIRAS1O95057 198 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 GABARAPO95166 117 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 SERPINB10P48595 397 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 ANXA11P50995 505 aaKnown RBP11.27□□□□□ -0.6
CAPN9-203ENST00000366666 GP2P55259 537 aaKnown RBP11.27□□□□□ -0.6
CAPN9-203ENST00000366666 RNF4P78317 190 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 POU6F2P78424 691 aaPredicted RBP11.27□□□□□ -0.6
CAPN9-203ENST00000366666 KCNJ10P78508 379 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 FOXC1Q12948 553 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 DGUOKQ16854 277 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 LAIR2Q6ISS4 152 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 EIF3MQ7L2H7 374 aaKnown RBP11.27□□□□□ -0.6
CAPN9-203ENST00000366666 TSEN54Q7Z6J9 526 aaKnown RBP11.27□□□□□ -0.6
CAPN9-203ENST00000366666 ARSGQ96EG1 525 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 PYURFQ96I23 114 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 BTBD2Q9BX70 525 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 WWTR1Q9GZV5 400 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 ZNF350Q9GZX5 532 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 EXD2Q9NVH0 621 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 THUMPD1Q9NXG2 353 aaKnown RBP11.27□□□□□ -0.6
CAPN9-203ENST00000366666 FLRT3Q9NZU0 649 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 PPIEQ9UNP9 301 aaKnown RBP11.27□□□□□ -0.6
CAPN9-203ENST00000366666 WDR45Q9Y484 360 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 ORC6Q9Y5N6 252 aa11.27□□□□□ -0.6
CAPN9-203ENST00000366666 PCNX3Q9H6A9 2034 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 TRBV11-1A0A0K0K1C0 115 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 TRABD2BA6NFA1 517 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 MRPS14O60783 128 aaKnown RBP11.27□□□□□ -0.61
CAPN9-203ENST00000366666 ITGAMP11215 1152 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 PIGAP37287 484 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 PPICP45877 212 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 NR0B1P51843 470 aaKnown RBP11.27□□□□□ -0.61
CAPN9-203ENST00000366666 RPS15P62841 145 aaKnown RBP11.27□□□□□ -0.61
CAPN9-203ENST00000366666 SELENOWP63302 87 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 VLDLRP98155 873 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 ZNHIT3Q15649 155 aaPredicted RBP11.27□□□□□ -0.61
CAPN9-203ENST00000366666 BTBD16Q32M84 506 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 VASH2Q86V25 355 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 IL22RA1Q8N6P7 574 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 BCORP1Q8N888 145 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 SETD9Q8NE22 299 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 OR4D11Q8NGI4 311 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 IMMP1LQ96LU5 166 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 DGCR6LQ9BY27 220 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 ZNF700Q9H0M5 742 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 MOV10Q9HCE1 1003 aaKnown RBP11.27□□□□□ -0.61
CAPN9-203ENST00000366666 BCL2L10Q9HD36 194 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 RLIMQ9NVW2 624 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 PRODH2Q9UF12 536 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 CBLCQ9ULV8 474 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 LIPT1Q9Y234 373 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 PADI2Q9Y2J8 665 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 OR10H1Q9Y4A9 318 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 HSPE1-MOB4S4R3N1 261 aa11.27□□□□□ -0.61
CAPN9-203ENST00000366666 hCG_2039718K7EN88 272 aa11.26□□□□□ -0.61
CAPN9-203ENST00000366666 SEMG1P04279 462 aa11.26□□□□□ -0.61
CAPN9-203ENST00000366666 ACVR2AP27037 513 aa11.26□□□□□ -0.61
CAPN9-203ENST00000366666 DCTP40126 519 aa11.26□□□□□ -0.61
CAPN9-203ENST00000366666 CXCR4P61073 352 aa11.26□□□□□ -0.61
CAPN9-203ENST00000366666 Q0VFX4 171 aa11.26□□□□□ -0.61
CAPN9-203ENST00000366666 CDK5R2Q13319 367 aa11.26□□□□□ -0.61
CAPN9-203ENST00000366666 PUM1Q14671 1186 aaKnown RBP eCLIP11.26□□□□□ -0.61
CAPN9-203ENST00000366666 FAM209AQ5JX71 171 aa11.26□□□□□ -0.61
CAPN9-203ENST00000366666 ZBTB46Q86UZ6 589 aa11.26□□□□□ -0.61
CAPN9-203ENST00000366666 HEATR5AQ86XA9 2040 aa11.26□□□□□ -0.61
CAPN9-203ENST00000366666 RBM45Q8IUH3 476 aaKnown RBP11.26□□□□□ -0.61
CAPN9-203ENST00000366666 LACC1Q8IV20 430 aa11.26□□□□□ -0.61
CAPN9-203ENST00000366666 ZNF441Q8N8Z8 693 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms