RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 FARSBQ9NSD9 589 aaKnown RBP7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 MED17Q9NVC6 651 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 NUDT4Q9NZJ9 180 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 RNF14Q9UBS8 474 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 ADAM29Q9UKF5 820 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 OR10H1Q9Y4A9 318 aa7.42□□□□□ -1.22
HMGB1P39-201ENST00000366304 WNK1Q9H4A3 2382 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 GXYLT2A0PJZ3 443 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 C7orf72A4D263 438 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 ATP6V1G2-DDX39BF2Z307 99 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 J3QW42 95 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 M0R1B8 84 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 OR7A17O14581 309 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 DNALI1O14645 258 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF500O60304 480 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 RAD51DO75771 328 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 UTS2O95399 124 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 STAMBPO95630 424 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 IL33O95760 270 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 IGHV3-9P01782 118 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 IGFBP1P08833 259 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 APEX1P27695 318 aaKnown RBP7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 ALDH9A1P49189 494 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 PRR5P85299 388 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 POU4F1Q01851 419 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 CCNIQ14094 377 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 CPTPQ5TA50 214 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 TMEM108Q6UXF1 575 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 FCRLAQ7L513 359 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 GOLGA7Q7Z5G4 137 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZAR1Q86SH2 424 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 SVOPLQ8N434 492 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZDHHC22Q8N966 263 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 WDR31Q8NA23 367 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 GATSQ8NAP1 163 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 NUP43Q8NFH3 380 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 OR4C3Q8NH37 302 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 FAM110BQ8TC76 370 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 TAF15Q92804 592 aaKnown RBP eCLIP7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 MUCL1Q96DR8 90 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 SERPINI1Q99574 410 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 PSD2Q9BQI7 771 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 NAT9Q9BTE0 207 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 BCO1Q9HAY6 547 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 SDHAF3Q9NRP4 125 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 PAQR5Q9NXK6 330 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 FRRS1LQ9P0K9 344 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 UTS2RQ9UKP6 389 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 MGAT4BQ9UQ53 548 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 TRAF6Q9Y4K3 522 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 ATP23Q9Y6H3 246 aa7.41□□□□□ -1.22
HMGB1P39-201ENST00000366304 GOLGA6L10A0A0M3HER8 536 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 PLOD3O60568 738 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 KERAO60938 352 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 PRKD3O94806 890 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 PSMG1O95456 288 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 S100BP04271 92 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 LINGO3P0C6S8 592 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 PGCP20142 388 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 PTAFRP25105 342 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZFP36P26651 326 aaKnown RBP7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 GIFP27352 417 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 APOBEC3AP31941 199 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 RFX3P48380 749 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF75DP51815 510 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 DVL1P1P54792 670 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 MRPS22P82650 360 aaKnown RBP7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 CHRNB3Q05901 458 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZNF155Q12901 538 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 GTF2H2Q13888 395 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 RNPS1Q15287 305 aaKnown RBP7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 CYP27C1Q4G0S4 372 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 SGO1Q5FBB7 561 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 GTF2H2CQ6P1K8 395 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 SHISA2Q6UWI4 295 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 CMC1Q7Z7K0 106 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 TBC1D1Q86TI0 1168 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 CARM1Q86X55 608 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 ZCCHC24Q8N2G6 241 aaKnown RBP7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 TRPC4APQ8TEL6 797 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 EXOSC8Q96B26 276 aaKnown RBP7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 GPR22Q99680 433 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 C1QTNF5Q9BXJ0 243 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 IPPKQ9H8X2 491 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 GRPEL1Q9HAV7 217 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 PCDHB10Q9UN67 800 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 ACOT9Q9Y305 439 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 PMF1-BGLAPU3KQ54 211 aa7.4□□□□□ -1.22
HMGB1P39-201ENST00000366304 A0A087WZY1 265 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 LYNX1G3V0Z9 82 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 TRIM77I1YAP6 450 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 PPP6CO00743 305 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 WNT9BO14905 357 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 NDUFB5O43674 189 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 UGDHO60701 494 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 ITGA5P08648 1049 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 LYNX1P0DP58 116 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 PRIM2P49643 509 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 CHN2P52757 468 aa7.39□□□□□ -1.23
HMGB1P39-201ENST00000366304 PHC1P78364 1004 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms