RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 WSB1Q9Y6I7 421 aa2.72□□□□□ -1.97
RNU4-28P-201ENST00000364739 NPIPB7O75200 414 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 RALAP11233 206 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 ANXA3P12429 323 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 EPHX2P34913 555 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 GABPB1Q06547 395 aaPredicted RBP2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 PDIA5Q14554 519 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 MIER3Q7Z3K6 550 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 LINC01561Q8N1V8 128 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 ZNF713Q8N859 430 aaPredicted RBP2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 STKLD1Q8NE28 680 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 FCGR1BQ92637 280 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 RPUSD4Q96CM3 377 aaKnown RBP2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 MS4A14Q96JA4 679 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 CYP2S1Q96SQ9 504 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 RUFY1Q96T51 708 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 MBOAT4Q96T53 435 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 GALPQ9UBC7 116 aa2.71□□□□□ -1.98
RNU4-28P-201ENST00000364739 ABCC4O15439 1325 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 TRBV6-6A0A0A6YYG2 114 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 PSMB11A5LHX3 300 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 TCP11X1B4DZS4 312 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 EFNA2O43921 213 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 STX11O75558 287 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 HLA-DPA1P20036 260 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 CCNCP24863 283 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 ATP5A1P25705 553 aaKnown RBP2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 CYLC1P35663 651 aaPredicted RBP2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 RGS1Q08116 209 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 CHI3L2Q15782 390 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 LRRC70Q7Z2Q7 622 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 VPS36Q86VN1 386 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 SNX32Q86XE0 403 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 EFCAB13Q8IY85 973 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 MSANTD4Q8NCY6 345 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 OR9A1PQ8NGU1 263 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 ARHGDIGQ99819 225 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 YAE1D1Q9NRH1 226 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 SCML2Q9UQR0 700 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 CDH10Q9Y6N8 788 aa2.7□□□□□ -1.98
RNU4-28P-201ENST00000364739 IGKV6-21A0A0C4DH24 114 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 A6NDX4 124 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 LRRC30A6NM36 301 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 FAM166BA8MTA8 275 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 A8MUA0 341 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 SNAI2O43623 268 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 AKR7A3O95154 331 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 INSP01308 110 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 BCKDHAP12694 445 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 RCC1P18754 421 aaPredicted RBP2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 OAS2P29728 719 aaKnown RBP2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 BDKRB1P46663 353 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 GPNMBQ14956 572 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 TMEM184AQ6ZMB5 413 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 Q8N9W7 124 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 MINDY2Q8NBR6 621 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 NEIL3Q8TAT5 605 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 DQX1Q8TE96 717 aaKnown RBP2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 PPDPFQ9H3Y8 114 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 RHOJQ9H4E5 214 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 APMAPQ9HDC9 416 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 MMP26Q9NRE1 261 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 CRLS1Q9UJA2 301 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 ANGPTL2Q9UKU9 493 aa2.69□□□□□ -1.98
RNU4-28P-201ENST00000364739 TTC21BQ7Z4L5 1316 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 H3BMQ9 156 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 IGHV4-34P06331 123 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 UQCRBP14927 111 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 H2AFXP16104 143 aaPredicted RBP2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 SERPINA2P20848 420 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 HTR1FP30939 366 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 MAGEA5P43359 124 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 PPP2R5CQ13362 524 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 PDK1Q15118 436 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 UNQ9370/PRO34162Q6UXP9 181 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 RNF148Q8N7C7 305 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 ANKRD20A12PQ8NF67 263 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 IL1F10Q8WWZ1 152 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 OR1E3Q8WZA6 343 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 TMEM186Q96B77 213 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 SDSLQ96GA7 329 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 NMNAT2Q9BZQ4 307 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 SH2D2AQ9NP31 389 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 ANO10Q9NW15 660 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 SPASTQ9UBP0 616 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 CCDC7Q96M83 1385 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 CUX2O14529 1486 aa2.68□□□□□ -1.98
RNU4-28P-201ENST00000364739 IGKV2D-24A0A075B6R9 120 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 OR6C65A6NJZ3 312 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 KLF8O95600 359 aaPredicted RBP2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 MT-ATP6P00846 226 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 MMP1P03956 469 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 CA3P07451 260 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 HBQ1P09105 142 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 CCDC192P0DO97 292 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 LHX2P50458 406 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 CSNK1G2P78368 415 aa2.67□□□□□ -1.98
RNU4-28P-201ENST00000364739 NTHL1P78549 312 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms