RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 LMX1AQ8TE12 382 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 NEDD4LQ96PU5 975 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 HCN3Q9P1Z3 774 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 ABCA7Q8IZY2 2146 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 THADAQ6YHU6 1953 aa20.96■□□□□ 0.95
LDB1-201ENST00000361198 A0A1W2PR77 199 aa20.95■□□□□ 0.95
LDB1-201ENST00000361198 SEC14L5O43304 696 aa20.95■□□□□ 0.95
LDB1-201ENST00000361198 OR10H2O60403 315 aa20.95■□□□□ 0.95
LDB1-201ENST00000361198 CD27P26842 260 aa20.95■□□□□ 0.95
LDB1-201ENST00000361198 SF3B4Q15427 424 aaKnown RBP eCLIP20.95■□□□□ 0.953e-8■■□□□ 11.5
LDB1-201ENST00000361198 ZNF362Q5T0B9 420 aaPredicted RBP20.95■□□□□ 0.95
LDB1-201ENST00000361198 RSBN1Q5VWQ0 802 aaPredicted RBP20.95■□□□□ 0.95
LDB1-201ENST00000361198 SLC30A6Q6NXT4 461 aa20.95■□□□□ 0.95
LDB1-201ENST00000361198 HSDL2Q6YN16 418 aa20.95■□□□□ 0.95
LDB1-201ENST00000361198 ZAR1Q86SH2 424 aa20.95■□□□□ 0.95
LDB1-201ENST00000361198 RANBP3LQ86VV4 465 aaPredicted RBP20.95■□□□□ 0.95
LDB1-201ENST00000361198 TM9SF4Q92544 642 aa20.95■□□□□ 0.95
LDB1-201ENST00000361198 PRSS27Q9BQR3 290 aa20.95■□□□□ 0.95
LDB1-201ENST00000361198 MIXL1Q9H2W2 232 aa20.95■□□□□ 0.95
LDB1-201ENST00000361198 IL20Q9NYY1 176 aa20.95■□□□□ 0.95
LDB1-201ENST00000361198 SPIN1Q9Y657 262 aaPredicted RBP20.95■□□□□ 0.95
LDB1-201ENST00000361198 CDHR4A6H8M9 788 aa20.95■□□□□ 0.94
LDB1-201ENST00000361198 SNTNA6NMZ2 147 aa20.95■□□□□ 0.94
LDB1-201ENST00000361198 METTL12A8MUP2 240 aa20.95■□□□□ 0.94
LDB1-201ENST00000361198 FOXS1O43638 330 aa20.95■□□□□ 0.94
LDB1-201ENST00000361198 BRINP1O60477 761 aa20.95■□□□□ 0.94
LDB1-201ENST00000361198 STAT5AP42229 794 aa20.95■□□□□ 0.94
LDB1-201ENST00000361198 CAPZBP47756 277 aa20.95■□□□□ 0.94
LDB1-201ENST00000361198 SLC9A3P48764 834 aa20.95■□□□□ 0.94
LDB1-201ENST00000361198 POU6F2P78424 691 aaPredicted RBP20.95■□□□□ 0.94
LDB1-201ENST00000361198 ZC3H14Q6PJT7 736 aaKnown RBP20.95■□□□□ 0.94
LDB1-201ENST00000361198 OR4Q3Q8NH05 313 aa20.95■□□□□ 0.94
LDB1-201ENST00000361198 IL20RAQ9UHF4 553 aa20.95■□□□□ 0.94
LDB1-201ENST00000361198 CARD8Q9Y2G2 431 aa20.95■□□□□ 0.94
LDB1-201ENST00000361198 TGFBR3LH3BV60 316 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 CDC42EP2O14613 210 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 CDC123O75794 336 aaPredicted RBP20.94■□□□□ 0.94
LDB1-201ENST00000361198 APOL3O95236 402 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 CH25HO95992 272 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 IFI6P09912 130 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 MXD1Q05195 221 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 ZNF155Q12901 538 aaPredicted RBP20.94■□□□□ 0.94
LDB1-201ENST00000361198 UBXN2BQ14CS0 331 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 MINDY4Q4G0A6 757 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 C22orf42Q6IC83 251 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 SLC36A4Q6YBV0 504 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 KCTD7Q96MP8 289 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 SLC38A2Q96QD8 506 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 ABCB9Q9NP78 766 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 RGS13O14921 159 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 KRT8P05787 483 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 PROS1P07225 676 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 S1PR1P21453 382 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 RFX3P48380 749 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 PLAURQ03405 335 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 SCN1BQ07699 218 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 CCDC92Q53HC0 331 aaPredicted RBP20.94■□□□□ 0.94
LDB1-201ENST00000361198 XKRXQ6PP77 449 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 WDR88Q6ZMY6 472 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 ZNF517Q6ZMY9 492 aaPredicted RBP20.94■□□□□ 0.94
LDB1-201ENST00000361198 PRR23CQ6ZRP0 262 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 ANKK1Q8NFD2 765 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 TOR1AIP2Q8NFQ8 470 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 ARSGQ96EG1 525 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 PEX11GQ96HA9 241 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 NLGN3Q9NZ94 848 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 ZNF221Q9UK13 617 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 PCDH15Q96QU1 1955 aa20.94■□□□□ 0.94
LDB1-201ENST00000361198 A0A1W2PQ09 198 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 TRAPPC13A5PLN9 417 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 SRPX2O60687 465 aaPredicted RBP20.93■□□□□ 0.94
LDB1-201ENST00000361198 NKX2-2O95096 273 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 AK1P00568 194 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 TSPAN19P0C672 248 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 MAT1AQ00266 395 aaKnown RBP20.93■□□□□ 0.94
LDB1-201ENST00000361198 PSG6Q00889 435 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 HNRNPA0Q13151 305 aaKnown RBP20.93■□□□□ 0.94
LDB1-201ENST00000361198 ASAH1Q13510 395 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 OR1Q1Q15612 314 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 OR2G6Q5TZ20 316 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 CHRDL2Q6WN34 429 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 ZNF620Q6ZNG0 422 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 RAB43Q86YS6 212 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 ZNF485Q8NCK3 441 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 OSTF1Q92882 214 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 TMEM203Q969S6 136 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 RNFT2Q96EX2 444 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 SLC38A3Q99624 504 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 TIGARQ9NQ88 270 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 TRIOBPQ9H2D6 2365 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 SDK1Q7Z5N4 2213 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 A0A1W2PQL4 384 aaPredicted RBP20.93■□□□□ 0.94
LDB1-201ENST00000361198 KDM4EB2RXH2 506 aaPredicted RBP20.93■□□□□ 0.94
LDB1-201ENST00000361198 CLEC2LP0C7M8 214 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 MTNR1AP48039 350 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 ERV3-1Q14264 604 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 NDUFA5Q16718 116 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 CD200R1LQ6Q8B3 271 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 GKN2Q86XP6 184 aa20.93■□□□□ 0.94
LDB1-201ENST00000361198 HOXB13Q92826 284 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms