RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 FAM72BQ86X60 149 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 CLRN3Q8NCR9 226 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 SLC2A13Q96QE2 648 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 SDHAF3Q9NRP4 125 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 SIPA1L3O60292 1781 aaPredicted RBP8.28□□□□□ -1.08
COL6A6-201ENST00000358511 GRXCR1A8MXD5 290 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 PTHP01270 115 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 MAT2AP31153 395 aaKnown RBP8.28□□□□□ -1.08
COL6A6-201ENST00000358511 HTD2P86397 168 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 PDGFRLQ15198 375 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 C18orf63Q68DL7 685 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 C14orf80Q86SX3 495 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 CMTM1Q8IZ96 169 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 OR52H1Q8NGJ2 320 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 UBXN10Q96LJ8 280 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 SAP130Q9H0E3 1048 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 SLC7A11Q9UPY5 501 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 C17orf113A0A1B0GUU1 675 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 DFFBO76075 338 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 HCCSP53701 268 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 MAP2K5Q13163 448 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 TMEM35AQ53FP2 167 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 SLC46A3Q7Z3Q1 461 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 GRAMD2AQ8IUY3 354 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 ZBTB44Q8NCP5 570 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 DUS2Q9NX74 493 aaKnown RBP8.28□□□□□ -1.08
COL6A6-201ENST00000358511 V9GY05 133 aa8.28□□□□□ -1.08
COL6A6-201ENST00000358511 TUBAL3A6NHL2 446 aa8.27□□□□□ -1.08
COL6A6-201ENST00000358511 NPIPA7E9PJI5 369 aa8.27□□□□□ -1.08
COL6A6-201ENST00000358511 MPC1LP0DKB6 136 aa8.27□□□□□ -1.08
COL6A6-201ENST00000358511 NPIPA8P0DM63 369 aa8.27□□□□□ -1.08
COL6A6-201ENST00000358511 PRKCZQ05513 592 aa8.27□□□□□ -1.08
COL6A6-201ENST00000358511 CRYZQ08257 329 aaKnown RBP8.27□□□□□ -1.08
COL6A6-201ENST00000358511 AAK1Q2M2I8 961 aa8.27□□□□□ -1.08
COL6A6-201ENST00000358511 ZBTB37Q5TC79 503 aa8.27□□□□□ -1.08
COL6A6-201ENST00000358511 MAVSQ7Z434 540 aa8.27□□□□□ -1.08
COL6A6-201ENST00000358511 PLPP5Q8NEB5 264 aa8.27□□□□□ -1.08
COL6A6-201ENST00000358511 OR5T1Q8NG75 326 aa8.27□□□□□ -1.08
COL6A6-201ENST00000358511 OR10Z1Q8NGY1 313 aa8.27□□□□□ -1.08
COL6A6-201ENST00000358511 SOX1O00570 391 aaPredicted RBP8.27□□□□□ -1.09
COL6A6-201ENST00000358511 CSNK2A1P68400 391 aaPredicted RBP8.27□□□□□ -1.09
COL6A6-201ENST00000358511 NFATC4Q14934 902 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 FCN2Q15485 313 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 NAGSQ8N159 534 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 NAXEQ8NCW5 288 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 CSNK2A3Q8NEV1 391 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 SLAMF7Q9NQ25 335 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 TMPRSS11EQ9UL52 423 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 K7EPK0 472 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 KCNK2O95069 426 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 CSTAP01040 98 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 TCRBP04435 133 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 BPIP17213 487 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 PIGAP37287 484 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 FAM189BP81408 668 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 RSU1Q15404 277 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 BEX5Q5H9J7 111 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 UNQ6126/PRO20091Q6UXV3 157 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 NLRP8Q86W28 1048 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 FAM71E2Q8N5Q1 922 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 PXYLP1Q8TE99 480 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 SAMD8Q96LT4 415 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 SLC25A18Q9H1K4 315 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 OR52A5Q9H2C5 316 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 GALNT9Q9HCQ5 603 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 PLEKHM1Q9Y4G2 1056 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 TRAV20A0A0B4J274 112 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 OR5H15A6NDH6 313 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 OR5H14A6NHG9 310 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 OR5H1A6NKK0 313 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 GRIN3BO60391 1043 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 CRTAPO75718 401 aaPredicted RBP8.27□□□□□ -1.09
COL6A6-201ENST00000358511 NCR1O76036 304 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 PDZK1IP1Q13113 114 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 CAMK2DQ13557 499 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 RNF212Q495C1 297 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 KDM4DQ6B0I6 523 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 FAM124AQ86V42 546 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 ZNF440Q8IYI8 595 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 SYT11Q9BT88 431 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 FZD3Q9NPG1 666 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 REV1Q9UBZ9 1251 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 FZD1Q9UP38 647 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 PRELID3BQ9Y3B1 194 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 MPDZO75970 2070 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 KCPQ6ZWJ8 1503 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 C1orf226A1L170 272 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 C11orf98E9PRG8 122 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 C1GALT1C1LP0DN25 315 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 ZP3P21754 424 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 TAS2R38P59533 333 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 ARSIQ5FYB1 569 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 SULF2Q8IWU5 870 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 PCNPQ8WW12 178 aaKnown RBP8.27□□□□□ -1.09
COL6A6-201ENST00000358511 SEMA4GQ9NTN9 838 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 NDRG3Q9UGV2 375 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 IL20RAQ9UHF4 553 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 D6RAR5 112 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 CPT2P23786 658 aa8.27□□□□□ -1.09
COL6A6-201ENST00000358511 AARDQ4LEZ3 155 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms