RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 NIPA2Q8N8Q9 360 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 ACSS3Q9H6R3 686 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 PCDHA9Q9Y5H5 950 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 RFPL2O75678 378 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 MBP02144 154 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 GPX6P59796 221 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 ARHGAP1Q07960 439 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 RBMXL1Q96E39 390 aaKnown RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 PGAP3Q96FM1 320 aaPredicted RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 CNTNAP3BQ96NU0 1288 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 MACROD1Q9BQ69 325 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 ADAMTS10Q9H324 1103 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 ZMAT5Q9UDW3 170 aaKnown RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 PLLPQ9Y342 182 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 TGDSO95455 350 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 ZNF888P0CJ79 500 aaPredicted RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 PIPP12273 146 aaPredicted RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 RPS5P46782 204 aaKnown RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 CSN1S1P47710 185 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 CLDN2P57739 230 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 MBTPS1Q14703 1052 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 P2RY14Q15391 338 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 DEFB109BQ30KR1 87 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 B3GLCTQ6Y288 498 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 RHEBL1Q8TAI7 183 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 ZNF641Q96N77 438 aaPredicted RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 KCNA7Q96RP8 456 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 NTPCRQ9BSD7 190 aaKnown RBP9.22□□□□□ -0.93
CHD3-202ENST00000358181 KIF1AQ12756 1690 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 PMS2P1A4D2B8 440 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 EI24O14681 340 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 XRCC3O43542 346 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 CHRNB1P11230 501 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 SERPINF1P36955 418 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 RABIFP47224 123 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 HK3P52790 923 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 PGGT1BP53609 377 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 ZP2Q05996 745 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 LIPJQ5W064 366 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 AGTRAPQ6RW13 159 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 SSX9Q7RTT3 188 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 GID4Q8IVV7 300 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 TRIB1Q96RU8 372 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 DPH7Q9BTV6 452 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 DEFB127Q9H1M4 99 aa9.22□□□□□ -0.93
CHD3-202ENST00000358181 LOC102725191A0A1B0GVB3 256 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 F5H697 171 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 CELP19835 753 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 CXCL12P48061 93 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 GPLD1P80108 840 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 GINS1Q14691 196 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 DPY19L1Q2PZI1 675 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 ZNF704Q6ZNC4 412 aaPredicted RBP9.21□□□□□ -0.93
CHD3-202ENST00000358181 OR2T33Q8NG76 320 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 NEIL3Q8TAT5 605 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 TMBIM1Q969X1 311 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 UBL7Q96S82 380 aaPredicted RBP9.21□□□□□ -0.93
CHD3-202ENST00000358181 ACTRT3Q9BYD9 372 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 SLC39A9Q9NUM3 307 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 ZDHHC7Q9NXF8 308 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 MMACHCQ9Y4U1 282 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 KCTD3Q9Y597 815 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 IGHV3-9P01782 118 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 PROS1P07225 676 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 PCGF2P35227 344 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 RPS15AP62244 130 aaKnown RBP9.21□□□□□ -0.93
CHD3-202ENST00000358181 CYBRD1Q53TN4 286 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 CCNJQ5T5M9 372 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 TMEM150AQ86TG1 271 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 BAGE3Q86Y29 109 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 BAGE2Q86Y30 109 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 CCDC71Q8IV32 467 aaPredicted RBP9.21□□□□□ -0.93
CHD3-202ENST00000358181 SCML4Q8N228 414 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 PAQR8Q8TEZ7 354 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 SNAPC3Q92966 411 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 SGPP1Q9BX95 441 aa9.21□□□□□ -0.93
CHD3-202ENST00000358181 C8orf33Q9H7E9 229 aaPredicted RBP9.21□□□□□ -0.93
CHD3-202ENST00000358181 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.21□□□□□ -0.94
CHD3-202ENST00000358181 UQCRC2P22695 453 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 AQP4P55087 323 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 CLINT1Q14677 625 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 C22orf42Q6IC83 251 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 MFSD12Q6NUT3 480 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 TRILQ7L0X0 811 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 ADGRF3Q8IZF5 1079 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 SLC35G3Q8N808 338 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 PYURFQ96I23 114 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 TMEM43Q9BTV4 400 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 NUDT9Q9BW91 350 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 NMNAT2Q9BZQ4 307 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 CXorf21Q9HAI6 301 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 BOKQ9UMX3 212 aaPredicted RBP9.21□□□□□ -0.94
CHD3-202ENST00000358181 NUMA1Q14980 2115 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 LRRC10BA6NIK2 292 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 SNHG28P0DPA3 235 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 CARD18P57730 90 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 PCGF3Q3KNV8 242 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 NANOGP8Q6NSW7 305 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 DEFB108BQ8NET1 73 aa9.21□□□□□ -0.94
CHD3-202ENST00000358181 UPRTQ96BW1 309 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms