RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 NRMQ8IXM6 262 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 OR4K13Q8NH42 304 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 SPRYD4Q8WW59 207 aaPredicted RBP12.13□□□□□ -0.47
SMC4-202ENST00000357388 C10orf90Q96M02 699 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 TEPSINQ96N21 525 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 DPH2Q9BQC3 489 aaPredicted RBP12.13□□□□□ -0.47
SMC4-202ENST00000357388 RANGRFQ9HD47 186 aaPredicted RBP12.13□□□□□ -0.47
SMC4-202ENST00000357388 DCAF13Q9NV06 445 aaKnown RBP12.13□□□□□ -0.47
SMC4-202ENST00000357388 PLEKHJ1Q9NW61 149 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 KIAA0355O15063 1070 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 PEX10O60683 326 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 HPGDSO60760 199 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 F2P00734 622 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 APOA2P02652 100 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 S100A8P05109 93 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 FGF4P08620 206 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 GRPRP30550 384 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 SRPXP78539 464 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 LFNGQ8NES3 379 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 SLC2A13Q96QE2 648 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 HERPUD2Q9BSE4 406 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 PLAGL1Q9UM63 463 aa12.13□□□□□ -0.47
SMC4-202ENST00000357388 AK6Q9Y3D8 172 aaKnown RBP12.13□□□□□ -0.47
SMC4-202ENST00000357388 H7BY64 318 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 SDC3O75056 442 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 MPIG6BO95866 241 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 MT-ND4P03905 459 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 EMX1Q04741 257 aaPredicted RBP12.12□□□□□ -0.47
SMC4-202ENST00000357388 ABHD17BQ5VST6 288 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 NANPQ8TBE9 248 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 ZNF300Q96RE9 604 aaPredicted RBP12.12□□□□□ -0.47
SMC4-202ENST00000357388 SGIP1Q9BQI5 828 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 IL23AQ9NPF7 189 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 TCRBV3S1A0A5B6 114 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 DVL2O14641 736 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 LEFTY1O75610 366 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 CD63P08962 238 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 PTBP1P26599 531 aaKnown RBP eCLIP12.12□□□□□ -0.47
SMC4-202ENST00000357388 SORDQ00796 357 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 MFGE8Q08431 387 aaPredicted RBP12.12□□□□□ -0.47
SMC4-202ENST00000357388 SLC14A1Q13336 389 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 DUSP6Q16828 381 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 Q6ZVL8 140 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 ZC3H3Q8IXZ2 948 aaKnown RBP12.12□□□□□ -0.47
SMC4-202ENST00000357388 CSNK1A1LQ8N752 337 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 OR4D6Q8NGJ1 314 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 NETO1Q8TDF5 533 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 LPAR4Q99677 370 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 SLC30A3Q99726 388 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 RBFOX1Q9NWB1 397 aaKnown RBP12.12□□□□□ -0.47
SMC4-202ENST00000357388 HLA-AP01891 365 aaKnown RBP12.12□□□□□ -0.47
SMC4-202ENST00000357388 CRHBPP24387 322 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 DDOSTP39656 456 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 SLC6A8P48029 635 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 WDR5P61964 334 aaKnown RBP12.12□□□□□ -0.47
SMC4-202ENST00000357388 CXADRP78310 365 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 RING1Q06587 406 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 CATSPEREQ5SY80 951 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 TMEM107Q6UX40 140 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 SCARB1Q8WTV0 552 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 KCNK13Q9HB14 408 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 PATZ1Q9HBE1 687 aaKnown RBP12.12□□□□□ -0.47
SMC4-202ENST00000357388 CDH20Q9HBT6 801 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 SLC6A14Q9UN76 642 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 DNAJC15Q9Y5T4 150 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 KPTNQ9Y664 436 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 IGKV6D-41A0A0C4DH26 115 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 MSTNO14793 375 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 TO15178 435 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 PPT1P50897 306 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 DAP3P51398 398 aaKnown RBP12.12□□□□□ -0.47
SMC4-202ENST00000357388 ZNF689Q96CS4 500 aaPredicted RBP12.12□□□□□ -0.47
SMC4-202ENST00000357388 SCML1Q9UN30 329 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 OR1A2Q9Y585 309 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 SLIT3O75094 1523 aa12.12□□□□□ -0.47
SMC4-202ENST00000357388 A0A087WZY1 265 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 A0A1W2PP55 124 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 A0A1W2PQU0 124 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 GPRIN2O60269 458 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 STK17BO94768 372 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 KITLGP21583 273 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 GABRB3P28472 473 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 SOX3P41225 446 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 CTXN1P60606 82 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 ID2Q02363 134 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 ACY1Q03154 408 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 OR10K2Q6IF99 312 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 SUSD1Q6UWL2 747 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 METTL2AQ96IZ6 378 aaKnown RBP12.11□□□□□ -0.47
SMC4-202ENST00000357388 SAMD8Q96LT4 415 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 PELI2Q9HAT8 420 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 C1orf123Q9NWV4 160 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 ABCC6O95255 1503 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 ARNTLO00327 626 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 IMPA2O14732 288 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 DFFBO76075 338 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 F7P08709 466 aaPredicted RBP12.11□□□□□ -0.47
SMC4-202ENST00000357388 GJA5P36382 358 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 GIPRP48546 466 aa12.11□□□□□ -0.47
SMC4-202ENST00000357388 SOHLH1Q5JUK2 328 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms