RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 SPIN2BQ9BPZ2 258 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 SEMA6CQ9H3T2 930 aa16.29■□□□□ 0.2
COL27A1-201ENST00000356083 PTHP01270 115 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 MAOAP21397 527 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 GAB1Q13480 694 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 CCDC28AQ8IWP9 274 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 AQP12AQ8IXF9 295 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 OR4A16Q8NH70 328 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 SLC29A3Q9BZD2 475 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 LIPT1Q9Y234 373 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 SLIT1O75093 1534 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 KIAA0513O60268 411 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 PKLRP30613 574 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 IL13RA1P78552 427 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 PLAC9Q5JTB6 97 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 MEDAGQ5VYS4 303 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 PDZD9Q8IXQ8 264 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 TWSG1Q9GZX9 223 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 WDR6Q9NNW5 1121 aaKnown RBP16.28■□□□□ 0.2
COL27A1-201ENST00000356083 DLX3O60479 287 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 ARSBP15848 533 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 UGT3A2Q3SY77 523 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 AADACL3Q5VUY0 350 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 TMEM130Q8N3G9 435 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 BANPQ8N9N5 519 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 MACROD1Q9BQ69 325 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 SEMA4CQ9C0C4 833 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 LRIT1Q9P2V4 623 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 CD207Q9UJ71 328 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 C2orf78A6NCI8 922 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 PSMB10P40306 273 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 GPX6P59796 221 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 EMX2Q04743 252 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 DCAF12Q5T6F0 453 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 TCEAL2Q9H3H9 227 aaPredicted RBP16.28■□□□□ 0.2
COL27A1-201ENST00000356083 C8orf33Q9H7E9 229 aaPredicted RBP16.28■□□□□ 0.2
COL27A1-201ENST00000356083 ZDHHC7Q9NXF8 308 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 A0A0U1RQF3 1178 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 BHLHE40O14503 412 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 SERPINF1P36955 418 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 HTR2BP41595 481 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 SDR9C7Q8NEX9 313 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 SLC7A7Q9UM01 511 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 ITGB2P05107 769 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 PFKMP08237 780 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 RPS5P46782 204 aaKnown RBP16.28■□□□□ 0.2
COL27A1-201ENST00000356083 NANOGP8Q6NSW7 305 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 ISOC1Q96CN7 298 aa16.28■□□□□ 0.2
COL27A1-201ENST00000356083 A6NIN4 97 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 G3V3Y1 287 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 TXNL1O43396 289 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 GYPBP06028 91 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 SOX9P48436 509 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 ACTBP60709 375 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 ACTG1P63261 375 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 C5AR1P21730 350 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 MTNR1AP48039 350 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 FAM26DQ5JW98 314 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 TNFRSF19Q9NS68 423 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 SNCGO76070 127 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 UBL4AP11441 157 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 HTR5AP47898 357 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 PGGT1BP53609 377 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 P2RY14Q15391 338 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 VASNQ6EMK4 673 aa16.27■□□□□ 0.2
COL27A1-201ENST00000356083 PLSCR1O15162 318 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 FOXD2O60548 495 aaPredicted RBP16.27■□□□□ 0.19
COL27A1-201ENST00000356083 TESK1Q15569 626 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 KIAA1191Q96A73 305 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 UHRF2Q96PU4 802 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 CSNK1G3Q9Y6M4 447 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 CRXO43186 299 aaPredicted RBP16.27■□□□□ 0.19
COL27A1-201ENST00000356083 CAPNS1P04632 268 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 GLO1Q04760 184 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 SPHARQ15513 63 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 TMEM25Q86YD3 366 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 HPSE2Q8WWQ2 592 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 NR4A3Q92570 626 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 OR6C2Q9NZP2 312 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 TARBP1Q13395 1621 aaKnown RBP16.27■□□□□ 0.19
COL27A1-201ENST00000356083 ABCA9Q8IUA7 1624 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 CXCL12P48061 93 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 TDGQ13569 410 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 SEZ6LQ9BYH1 1024 aa16.27■□□□□ 0.19
COL27A1-201ENST00000356083 FAAHO00519 579 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 MRPL33O75394 65 aaKnown RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 BAXQ07812 192 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 KCNC3Q14003 757 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 FKBP10Q96AY3 582 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 HYLS1Q96M11 299 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 MICU1Q9BPX6 476 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 NMES1Q9C002 83 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 TAS2R8Q9NYW2 309 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 ZNF736B4DX44 427 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 CA3P07451 260 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 TIA1P31483 386 aaKnown RBP eCLIP16.26■□□□□ 0.191e-6■□□□□ 8.2
COL27A1-201ENST00000356083 ARSFP54793 590 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 OR6F1Q8NGZ6 308 aa16.26■□□□□ 0.19
COL27A1-201ENST00000356083 ZNF689Q96CS4 500 aaPredicted RBP16.26■□□□□ 0.19
COL27A1-201ENST00000356083 ACTRT3Q9BYD9 372 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms