RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 MRPL2Q5T653 305 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 PRAMEF8Q5VWM4 474 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 PRAMEF7Q5VXH5 474 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 EIF3MQ7L2H7 374 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 MISPQ8IVT2 679 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 DEFB107AQ8IZN7 70 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 FAM83FQ8NEG4 500 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 B4GALNT2Q8NHY0 566 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 CNOT9Q92600 299 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 ZNF524Q96C55 264 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 TMEM181Q9P2C4 612 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 ABCD2Q9UBJ2 740 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 SUCOQ9UBS9 1254 aaKnown RBP16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 SEC14L3Q9UDX4 400 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 DKKL1Q9UK85 242 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 ZNF443Q9Y2A4 671 aaPredicted RBP16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 SHANK1Q9Y566 2161 aa16.25■□□□□ 0.19
PDLIM7-202ENST00000355841 IGLV3-32A0A0A0MS00 114 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 FAM220BPB1ANY3 271 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 SHISA8B8ZZ34 492 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 ZNF264O43296 627 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 OPN1SWP03999 348 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 NID1P14543 1247 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 DPP4P27487 766 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 PGM1P36871 562 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 GSK3BP49841 420 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 PCBP3P57721 371 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 SKP2Q13309 424 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 ZNF311Q5JNZ3 666 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 ZNF836Q6ZNA1 936 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 LSRQ86X29 649 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 PGAM4Q8N0Y7 254 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 CLIP4Q8N3C7 705 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 METTL25Q8N6Q8 603 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 FAM156AQ8NDB6 213 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 OR5M1Q8NGP8 315 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 OR14L1PQ8NHC6 308 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 MIB2Q96AX9 1013 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 CDRT15Q96T59 188 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 RASSF4Q9H2L5 321 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 ALG2Q9H553 416 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 LDAHQ9H6V9 325 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 TAS2R10Q9NYW0 307 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 ICAM5Q9UMF0 924 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 VDAC3Q9Y277 283 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 CHST2Q9Y4C5 530 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 GPC6Q9Y625 555 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 PCNX3Q9H6A9 2034 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 A0A1B0GTH9 108 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 ZIC3O60481 467 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 TPST1O60507 370 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 ADAM11O75078 769 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 NUDT14O95848 222 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 PABPC4LP0CB38 370 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 ETS2P15036 469 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 RYKP34925 604 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 MRPL49Q13405 166 aaKnown RBP16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 TOMM34Q15785 309 aaPredicted RBP16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 COMTD1Q86VU5 262 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 KRT73Q86Y46 540 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 MICU2Q8IYU8 434 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 SMYD1Q8NB12 490 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 PMM1Q92871 262 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 C1GALT1C1Q96EU7 318 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 NPAS1Q99742 590 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 SPATA9Q9BWV2 254 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 EXO5Q9H790 373 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 PTGES2Q9H7Z7 377 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 SLC6A5Q9Y345 797 aa16.24■□□□□ 0.19
PDLIM7-202ENST00000355841 ELOVL7A1L3X0 281 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 PRORSD1PA6NEY8 169 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 M0QX08 132 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 WISP1O95388 367 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 HPNP05981 417 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 TCN1P20061 433 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 ENDOUP21128 410 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 MSX2P35548 267 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 ADH7P40394 386 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 DSCR4P56555 118 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 EEF1A1P68104 462 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 LARS2Q15031 903 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 LIN52Q52LA3 116 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 C16orf89Q6UX73 402 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 GFRALQ6UXV0 394 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 TRILQ7L0X0 811 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 FGD2Q7Z6J4 655 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 ZNF605Q86T29 641 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 ZNF607Q96SK3 696 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 KCTD14Q9BQ13 255 aaPredicted RBP16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 CACYBPQ9HB71 228 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 DNAJB12Q9NXW2 375 aaKnown RBP16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 ZNF232Q9UNY5 417 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 SLC35A3Q9Y2D2 325 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 ZNF407Q9C0G0 2248 aa16.23■□□□□ 0.19
PDLIM7-202ENST00000355841 TRGV5A0A0B4J1U4 118 aa16.22■□□□□ 0.19
PDLIM7-202ENST00000355841 CDHR4A6H8M9 788 aa16.22■□□□□ 0.19
PDLIM7-202ENST00000355841 FRS3O43559 492 aa16.22■□□□□ 0.19
PDLIM7-202ENST00000355841 THBS1P07996 1170 aa16.22■□□□□ 0.19
PDLIM7-202ENST00000355841 GKN3PP0CG01 181 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms