RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 PRRC1Q96M27 445 aa16.94■□□□□ 0.3
COL18A1-202ENST00000355480 TSNAXQ99598 290 aaKnown RBP16.94■□□□□ 0.3
COL18A1-202ENST00000355480 AK6Q9Y3D8 172 aaKnown RBP16.94■□□□□ 0.3
COL18A1-202ENST00000355480 FOXE1O00358 373 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-202ENST00000355480 FOXD2O60548 495 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-202ENST00000355480 OR1D4P47884 311 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 RGS6P49758 472 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 PTPRRQ15256 657 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 SLC22A10Q63ZE4 541 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 SMIM14Q96QK8 99 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 NLKQ9UBE8 527 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 HEMK1Q9Y5R4 338 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-202ENST00000355480 ITGB8P26012 769 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 SMAD2Q15796 467 aaKnown RBP16.93■□□□□ 0.3
COL18A1-202ENST00000355480 IL20RBQ6UXL0 311 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 CHDHQ8NE62 594 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-202ENST00000355480 ZNF417Q8TAU3 575 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 CUEDC1Q9NWM3 386 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-202ENST00000355480 A0A0G2JMP0 313 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 GOSR2O14653 212 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 DENRO43583 198 aaKnown RBP16.93■□□□□ 0.3
COL18A1-202ENST00000355480 CHRM4P08173 479 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 DRD5P21918 477 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 HOXD9P28356 352 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-202ENST00000355480 RPE65Q16518 533 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 OPN5Q6U736 354 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 COMTD1Q86VU5 262 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 OR4M2Q8NGB6 313 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 CSNK1G1Q9HCP0 422 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 APMAPQ9HDC9 416 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 TMEM45AQ9NWC5 275 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 PCDHGA8Q9Y5G5 932 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 NUMBLQ9Y6R0 609 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 A0A1W2PQL4 384 aaPredicted RBP16.93■□□□□ 0.3
COL18A1-202ENST00000355480 BLACEA4D250 179 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 BMP4P12644 408 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 CD46P15529 392 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 BTBD2Q9BX70 525 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 TREX1Q9NSU2 369 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 VAPAQ9P0L0 249 aa16.93■□□□□ 0.3
COL18A1-202ENST00000355480 LOC285095A0A1B0GVY8 99 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 TVP23AA6NH52 213 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 DBHP09172 617 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 CPMP14384 443 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 RGRP47804 291 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 ZP2Q05996 745 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 PROX2Q3B8N5 592 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 SERPINA11Q86U17 422 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 MRPL41Q8IXM3 137 aaKnown RBP16.92■□□□□ 0.3
COL18A1-202ENST00000355480 OR7D2Q96RA2 312 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 PHB2Q99623 299 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 CCDC32Q9BV29 185 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 DPCDQ9BVM2 203 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-202ENST00000355480 FOLH1BQ9HBA9 442 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 DYNLRB1Q9NP97 96 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 LRP6O75581 1613 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 AKAP12Q02952 1782 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 WDPCPO95876 746 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 AOAHP28039 575 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 PSMB10P40306 273 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 S100A12P80511 92 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 MZT1Q08AG7 82 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 THSD1Q9NS62 852 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 BOKQ9UMX3 212 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-202ENST00000355480 AQP9O43315 295 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 C1SP09871 688 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 BMP1P13497 986 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 CST5P28325 142 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-202ENST00000355480 CAV2P51636 162 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 OR56B2PQ8NGI1 322 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 SLC25A18Q9H1K4 315 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 LSM5Q9Y4Y9 91 aaKnown RBP16.92■□□□□ 0.3
COL18A1-202ENST00000355480 SIGLEC1Q9BZZ2 1709 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 TRAV27A0A087WT01 109 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 NOTOA8MTQ0 251 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 SCRG1O75711 98 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 SERPINE2P07093 398 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 CNN3Q15417 329 aaKnown RBP16.92■□□□□ 0.3
COL18A1-202ENST00000355480 HAVCR2Q8TDQ0 301 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 TP53TG5Q9Y2B4 290 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 SLC16A7O60669 478 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 GJB3O75712 270 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 EDN1P05305 212 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 GABRR1P24046 479 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 RPS5P46782 204 aaKnown RBP16.92■□□□□ 0.3
COL18A1-202ENST00000355480 AGBL5Q8NDL9 886 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 INSM2Q96T92 566 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-202ENST00000355480 GPN2Q9H9Y4 310 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-202ENST00000355480 UBQLN4Q9NRR5 601 aa16.92■□□□□ 0.3
COL18A1-202ENST00000355480 ZNF443Q9Y2A4 671 aaPredicted RBP16.92■□□□□ 0.3
COL18A1-202ENST00000355480 HHLA1C9JL84 531 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 CD53P19397 219 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 MBTPS1Q14703 1052 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 RAB41Q5JT25 222 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 WBP2NLQ6ICG8 309 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 SULT4A1Q9BR01 284 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 PBDC1Q9BVG4 233 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 SLAMF7Q9NQ25 335 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 SLC6A5Q9Y345 797 aa16.91■□□□□ 0.3
COL18A1-202ENST00000355480 SHOXO15266 292 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms