RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 BEX2Q9BXY8 128 aa10.09□□□□□ -0.79
RTN3-204ENST00000354497 OR10A5Q9H207 317 aa10.09□□□□□ -0.79
RTN3-204ENST00000354497 LIN7BQ9HAP6 207 aa10.09□□□□□ -0.79
RTN3-204ENST00000354497 TAS2R7Q9NYW3 318 aa10.09□□□□□ -0.79
RTN3-204ENST00000354497 HEY2Q9UBP5 337 aa10.09□□□□□ -0.79
RTN3-204ENST00000354497 GRID1Q9ULK0 1009 aa10.09□□□□□ -0.79
RTN3-204ENST00000354497 RNF112Q9ULX5 631 aa10.09□□□□□ -0.79
RTN3-204ENST00000354497 DLGAP4Q9Y2H0 992 aa10.09□□□□□ -0.79
RTN3-204ENST00000354497 WBP11Q9Y2W2 641 aaKnown RBP10.09□□□□□ -0.79
RTN3-204ENST00000354497 AP4S1Q9Y587 144 aa10.09□□□□□ -0.79
RTN3-204ENST00000354497 RAI1Q7Z5J4 1906 aaPredicted RBP10.09□□□□□ -0.79
RTN3-204ENST00000354497 SONP18583 2426 aaKnown RBP10.09□□□□□ -0.79
RTN3-204ENST00000354497 TAPBPO15533 448 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 HCRTR2O43614 444 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 DNAJA2O60884 412 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 GMNNO75496 209 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 PPM1BO75688 479 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 SCELO95171 688 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 PGM3O95394 542 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 THBDP07204 575 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 ABHD2P08910 425 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 NR2F6P10588 404 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 KIR2DL2P43627 348 aaPredicted RBP10.08□□□□□ -0.8
RTN3-204ENST00000354497 GFRA1P56159 465 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 CLDN18P56856 261 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 CAV1Q03135 178 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 BTKQ06187 659 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 PLCXD2Q0VAA5 305 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 STX3Q13277 289 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 TRIM16LQ309B1 348 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 KHDRBS2Q5VWX1 349 aaKnown RBP10.08□□□□□ -0.8
RTN3-204ENST00000354497 SH2D5Q6ZV89 423 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 FIG4Q92562 907 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 EXT2Q93063 718 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 RGMAQ96B86 450 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 CTHRC1Q96CG8 243 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 REPS1Q96D71 796 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 CMTM7Q96FZ5 175 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 C1orf50Q9BV19 199 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 PAIP1Q9H074 479 aaKnown RBP10.08□□□□□ -0.8
RTN3-204ENST00000354497 KCNN2Q9H2S1 579 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 WDR41Q9HAD4 459 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 CDC42EP3Q9UKI2 254 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.08□□□□□ -0.8
RTN3-204ENST00000354497 SPEF1Q9Y4P9 236 aa10.08□□□□□ -0.8
RTN3-204ENST00000354497 FAM95CA0A1B0GW59 222 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 A0A1W2PS29 197 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 PRAMEF25A6NGN4 478 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 LRRC14BA6NHZ5 514 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 H3BSA7 217 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 KLF4O43474 513 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 ADAM11O75078 769 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 STK16O75716 305 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 TTC4O95801 387 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 CT62P0C5K7 136 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 SLC35E2BP0CK96 405 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 SLC35E2P0CK97 266 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 ZNF708P17019 499 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 DDX5P17844 614 aaKnown RBP10.07□□□□□ -0.8
RTN3-204ENST00000354497 NT5EP21589 574 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 TXNL4AP83876 142 aaKnown RBP10.07□□□□□ -0.8
RTN3-204ENST00000354497 RUNX1T1Q06455 604 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 FUT7Q11130 342 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 FAPQ12884 760 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 DLG1Q12959 904 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 SELENBP1Q13228 472 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 ETFDHQ16134 617 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 KCTD21Q4G0X4 260 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 CCDC58Q4VC31 144 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 C6orf52Q5T4I8 152 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 TEDDM1Q5T9Z0 273 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 MED27Q6P2C8 311 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 CYP20A1Q6UW02 462 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 TCAIMQ8N3R3 496 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 SPATA6LQ8N4H0 392 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 NAT8LQ8N9F0 302 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 HGDQ93099 445 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 UBE2E3Q969T4 207 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 ADIPOR1Q96A54 375 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 TAMM41Q96BW9 452 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 OMA1Q96E52 524 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 NXF5Q9H1B4 397 aaKnown RBP10.07□□□□□ -0.8
RTN3-204ENST00000354497 SLCO5A1Q9H2Y9 848 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 C8orf4Q9NR00 106 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 GRHL1Q9NZI5 618 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 EXO1Q9UQ84 846 aaKnown RBP10.07□□□□□ -0.8
RTN3-204ENST00000354497 DTX4Q9Y2E6 619 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 A0A0B4J203 849 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 TLDC2A0PJX2 215 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 ZSCAN5BA6NJL1 495 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 SEC14L5O43304 696 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 GPRIN2O60269 458 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 PEX14O75381 377 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 HMGN1P05114 100 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 GPX3P22352 226 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 DPP4P27487 766 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 SRD5A2P31213 254 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 PRKAR1BP31321 381 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 PTGDSP41222 190 aa10.07□□□□□ -0.8
RTN3-204ENST00000354497 ESRRGP62508 458 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms