RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 LAT2Q9GZY6 243 aa18.4■□□□□ 0.54
SIGMAR1-202ENST00000353468 SH2D2AQ9NP31 389 aa18.4■□□□□ 0.54
SIGMAR1-202ENST00000353468 EXOSC3Q9NQT5 275 aaKnown RBP18.4■□□□□ 0.54
SIGMAR1-202ENST00000353468 ANKRD10Q9NXR5 420 aa18.4■□□□□ 0.54
SIGMAR1-202ENST00000353468 GPR83Q9NYM4 423 aa18.4■□□□□ 0.54
SIGMAR1-202ENST00000353468 STOML1Q9UBI4 398 aa18.4■□□□□ 0.54
SIGMAR1-202ENST00000353468 TESQ9UGI8 421 aaKnown RBP18.4■□□□□ 0.54
SIGMAR1-202ENST00000353468 A4GNTQ9UNA3 340 aa18.4■□□□□ 0.54
SIGMAR1-202ENST00000353468 KCNMB2Q9Y691 235 aa18.4■□□□□ 0.54
SIGMAR1-202ENST00000353468 FFAR1O14842 300 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 ADAMDEC1O15204 470 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 OIP5O43482 229 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 EIF4E2O60573 245 aaKnown RBP18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 ADAM11O75078 769 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 RRM2P31350 389 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 PTGDSP41222 190 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 ACAA2P42765 397 aaKnown RBP18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 GAS1P54826 345 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 C17orf67Q0P5P2 114 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 SKP2Q13309 424 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 PIN1Q13526 163 aaPredicted RBP18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 GANABQ14697 944 aaKnown RBP18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 ENTPD8Q5MY95 495 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 SLC22A10Q63ZE4 541 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 CBLN3Q6UW01 205 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 ISLR2Q6UXK2 745 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 RTL4Q6ZR62 310 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 LINC00696Q6ZRV3 163 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 APLFQ8IW19 511 aaPredicted RBP18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 ICA1LQ8NDH6 482 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 DUSP19Q8WTR2 217 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 PRRC1Q96M27 445 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 ZNF552Q9H707 407 aaPredicted RBP18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 GALNT9Q9HCQ5 603 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 ACAD8Q9UKU7 415 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 CNOT11Q9UKZ1 510 aaKnown RBP18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 NTNG1Q9Y2I2 539 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 TESMINQ9Y4I5 508 aa18.39■□□□□ 0.53
SIGMAR1-202ENST00000353468 C2orf72A6NCS6 295 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 CPSF4LA6NMK7 179 aaKnown RBP18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 CASQ2O14958 399 aaPredicted RBP18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 HCRTR2O43614 444 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 FMO6PO60774 539 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 CCL3P10147 92 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 CASRP41180 1078 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 SPIBQ01892 262 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 OC90Q02509 493 aaPredicted RBP18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 ZNF117Q03924 483 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 EPS8Q12929 822 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 SNTA1Q13424 505 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 TRIP10Q15642 601 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 TSPYL5Q86VY4 417 aaPredicted RBP18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 ARSGQ96EG1 525 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 SH3YL1Q96HL8 342 aaPredicted RBP18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 ZNF559Q9BR84 538 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 OSBPL11Q9BXB4 747 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 REEP1Q9H902 201 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 CTPS2Q9NRF8 586 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 SDHAF3Q9NRP4 125 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 CNIH4Q9P003 139 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 RHCGQ9UBD6 479 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 C17orf51A8MQB3 221 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 CDK2AP1O14519 115 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 HTR2AP28223 471 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 RYKP34925 604 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 CD96P40200 585 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 IST1P53990 364 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 TAS2R41P59536 307 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 PPP1R8Q12972 351 aaKnown RBP18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 PRAMEF20Q5VT98 475 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 BROXQ5VW32 411 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 SLC30A6Q6NXT4 461 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 PLEKHM3Q6ZWE6 761 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 MDGA2Q7Z553 956 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 TMCO5AQ8N6Q1 288 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 NR4A3Q92570 626 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 UTP23Q9BRU9 249 aaKnown RBP18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 FNDC11Q9BVV2 318 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 NMNAT1Q9HAN9 279 aaPredicted RBP18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 ACER3Q9NUN7 267 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 VNN3Q9NY84 501 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 LRFN1Q9P244 771 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 SAMHD1Q9Y3Z3 626 aaKnown RBP18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 U3KQV3 271 aa18.38■□□□□ 0.53
SIGMAR1-202ENST00000353468 CPAMD8Q8IZJ3 1885 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 HEATR5AQ86XA9 2040 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 E2F6O75461 281 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 WDPCPO95876 746 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 F10P00742 488 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 LINGO3P0C6S8 592 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 IFNA8P32881 189 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 P2RX1P51575 399 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 CCR4P51679 360 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 CDH12P55289 794 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 TLE3Q04726 772 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 TUBA3CQ13748 450 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 OR1Q1Q15612 314 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 LPCAT4Q643R3 524 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 TUBA3EQ6PEY2 450 aa18.37■□□□□ 0.53
SIGMAR1-202ENST00000353468 LRRC69Q6ZNQ3 347 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms