RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 LRRC37A2A6NM11 1700 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 hCG_1809904A0A1W2PP81 198 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 A0A1W2PR64 198 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 A0A1W2PRV1 198 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 GFYI3L273 518 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 PRAF2O60831 178 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 TYRP14679 529 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 ELNP15502 786 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 SDC1P18827 310 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 LIMS1P48059 325 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF140P52738 457 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-203ENST00000349748 AP1S1P61966 158 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 SP3Q02447 781 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 PRKCZQ05513 592 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 ILF3Q12906 894 aaKnown RBP eCLIP9.95□□□□□ -0.82
CAPN3-203ENST00000349748 OR8G1Q15617 311 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 CPSF6Q16630 551 aaKnown RBP eCLIP9.95□□□□□ -0.82
CAPN3-203ENST00000349748 C12orf73Q69YU5 71 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF770Q6IQ21 691 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-203ENST00000349748 PRSS58Q8IYP2 241 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 OR5T3Q8NGG3 340 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 OR4L1Q8NH43 312 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 AMDHD1Q96NU7 426 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 OPN3Q9H1Y3 402 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-203ENST00000349748 HRASLSQ9HDD0 168 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 RNF186Q9NXI6 227 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 PTGFRNQ9P2B2 879 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 DSPPQ9NZW4 1301 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 IFITM10A6NMD0 228 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 MARCH11A6NNE9 402 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 E7EQ34 232 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 GOSR2O14653 212 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 UBBP0CG47 229 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 UBCP0CG48 685 aaKnown RBP9.95□□□□□ -0.82
CAPN3-203ENST00000349748 ADRB3P13945 408 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 VAMP1P23763 118 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 AVPR2P30518 371 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 CCR9P51686 369 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 F2RL1P55085 397 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 DAOAP59103 153 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 WDR5P61964 334 aaKnown RBP9.95□□□□□ -0.82
CAPN3-203ENST00000349748 RPS27AP62979 156 aaKnown RBP9.95□□□□□ -0.82
CAPN3-203ENST00000349748 UBA52P62987 128 aaKnown RBP9.95□□□□□ -0.82
CAPN3-203ENST00000349748 GAMTQ14353 236 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 C10orf91Q5T1B1 145 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 HEPHL1Q6MZM0 1159 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 THEM6Q8WUY1 208 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 ISOC2Q96AB3 205 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 RGMAQ96B86 450 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 LAT2Q9GZY6 243 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 WDCPQ9H6R7 721 aa9.95□□□□□ -0.82
CAPN3-203ENST00000349748 CACYBPQ9HB71 228 aaKnown RBP9.95□□□□□ -0.82
CAPN3-203ENST00000349748 HMX1Q9NP08 348 aaPredicted RBP9.95□□□□□ -0.82
CAPN3-203ENST00000349748 DOCK3Q8IZD9 2030 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-203ENST00000349748 TMEM129A0AVI4 362 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 ANKRD61A6NGH8 418 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 LOC730098B7Z3J9 87 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 LRRN3E7EW58 273 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 AP4M1O00189 453 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 MANBAO00462 879 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 PPM1DO15297 605 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 SOX15O60248 233 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 PMP2P02689 132 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 CPN1P15169 458 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 RCC1P18754 421 aaPredicted RBP9.94□□□□□ -0.82
CAPN3-203ENST00000349748 CPT2P23786 658 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 HTR2AP28223 471 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 XCR1P46094 333 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 SCAPQ12770 1279 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 EOGTQ5NDL2 527 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 HACD4Q5VWC8 232 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 TAPT1Q6NXT6 567 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 SFXN4Q6P4A7 337 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 APOOLQ6UXV4 268 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF852Q6ZMS4 543 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 SCD5Q86SK9 330 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 TPRA1Q86W33 373 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 NTAN1Q96AB6 310 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 APOLD1Q96LR9 279 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 F2RL3Q96RI0 385 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 TM6SF2Q9BZW4 377 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 LRRN3Q9H3W5 708 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 THSD1Q9NS62 852 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 ELOVL2Q9NXB9 296 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 CBLCQ9ULV8 474 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 FAM221BA6H8Z2 402 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 MBTPS2O43462 519 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 OR10H2O60403 315 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 OR10H3O60404 316 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF286BP0CG31 522 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 LAG3P18627 525 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 MMP15P51511 669 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 IL2P60568 153 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 RAB4BP61018 213 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 SF1Q15637 639 aaKnown RBP9.94□□□□□ -0.82
CAPN3-203ENST00000349748 KRBOX4Q5JUW0 171 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 MORN1Q5T089 497 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 ZNF626Q68DY1 528 aa9.94□□□□□ -0.82
CAPN3-203ENST00000349748 BAIAP2L2Q6UXY1 529 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms