RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 DLGAP3O95886 979 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 UMODP07911 640 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 OSMP13725 252 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 GSTM3P21266 225 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 ISL1P61371 349 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 GNPDA2Q8TDQ7 276 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 MESP1Q9BRJ9 268 aa17.18■□□□□ 0.34
PTN-201ENST00000348225 MRPS26Q9BYN8 205 aaKnown RBP17.18■□□□□ 0.34
PTN-201ENST00000348225 ZFAND5O76080 213 aa17.17■□□□□ 0.34
PTN-201ENST00000348225 THY1P04216 161 aa17.17■□□□□ 0.34
PTN-201ENST00000348225 NGFRP08138 427 aa17.17■□□□□ 0.34
PTN-201ENST00000348225 UBL4AP11441 157 aa17.17■□□□□ 0.34
PTN-201ENST00000348225 ENDOUP21128 410 aaKnown RBP17.17■□□□□ 0.34
PTN-201ENST00000348225 CD47Q08722 323 aa17.17■□□□□ 0.34
PTN-201ENST00000348225 RBM48Q5RL73 367 aaKnown RBP17.17■□□□□ 0.34
PTN-201ENST00000348225 CD300LDQ6UXZ3 194 aa17.17■□□□□ 0.34
PTN-201ENST00000348225 MBOAT2Q6ZWT7 520 aa17.17■□□□□ 0.34
PTN-201ENST00000348225 ZER1Q7Z7L7 766 aa17.17■□□□□ 0.34
PTN-201ENST00000348225 NKAIN4Q8IVV8 208 aa17.17■□□□□ 0.34
PTN-201ENST00000348225 APLFQ8IW19 511 aaPredicted RBP17.17■□□□□ 0.34
PTN-201ENST00000348225 LSMEM1Q8N8F7 131 aa17.17■□□□□ 0.34
PTN-201ENST00000348225 DEFB124Q8NES8 71 aa17.17■□□□□ 0.34
PTN-201ENST00000348225 EXOSC3Q9NQT5 275 aaKnown RBP17.17■□□□□ 0.34
PTN-201ENST00000348225 OR6C70A6NIJ9 312 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 C9orf172C9J069 976 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 ICOSLGO75144 302 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 RAB40ALP0C0E4 278 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 MMP11P24347 488 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 EPHA2P29317 976 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 GGT2P36268 569 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 ACAA2P42765 397 aaKnown RBP17.16■□□□□ 0.34
PTN-201ENST00000348225 CRISP1P54107 249 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 TOP3AQ13472 1001 aaPredicted RBP17.16■□□□□ 0.34
PTN-201ENST00000348225 EFR3AQ14156 821 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 PCOLCEQ15113 449 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 FNDC7Q5VTL7 733 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 DEPDC4Q8N2C3 294 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 FAM71CQ8NEG0 241 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 TSPAN14Q8NG11 270 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 PHOSPHO1Q8TCT1 267 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 HDAC2Q92769 488 aaKnown RBP17.16■□□□□ 0.34
PTN-201ENST00000348225 ZNF700Q9H0M5 742 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 FLRT3Q9NZU0 649 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 SELENONQ9NZV5 590 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 RPS6KB2Q9UBS0 482 aa17.16■□□□□ 0.34
PTN-201ENST00000348225 IGHV1-45A0A0A0MS14 117 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 A0A0B4J2E0 115 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 A0A1B0GX12 115 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 A0A1W2PQD3 144 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 PMS2P1A4D2B8 440 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 GTPBP1O00178 669 aaKnown RBP17.15■□□□□ 0.34
PTN-201ENST00000348225 CHP2O43745 196 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 SMIM18P0DKX4 95 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 COPZ1P61923 177 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 ALDH6A1Q02252 535 aaKnown RBP17.15■□□□□ 0.34
PTN-201ENST00000348225 EXT1Q16394 746 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 C3orf38Q5JPI3 329 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 RNF113BQ8IZP6 322 aaKnown RBP17.15■□□□□ 0.34
PTN-201ENST00000348225 RNF217Q8TC41 542 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 FBLIM1Q8WUP2 373 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 REV1Q9UBZ9 1251 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 BLOC1S6Q9UL45 172 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 PCDHGA6Q9Y5G7 932 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 NPFFR2Q9Y5X5 522 aa17.15■□□□□ 0.34
PTN-201ENST00000348225 A0A1B0GWA3 101 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 ZNF264O43296 627 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 CHMP24386 653 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 ELK4P28324 431 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 MEP1AQ16819 746 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 C6orf141Q5SZD1 244 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 ESX1Q8N693 406 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 GATSQ8NAP1 163 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 GRHL3Q8TE85 626 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 CT55Q8WUE5 264 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 TMEM255BQ8WV15 326 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 TMEM239Q8WW34 195 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 MPP4Q96JB8 637 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 HS6ST2Q96MM7 605 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 PRSS27Q9BQR3 290 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 TBL1XR1Q9BZK7 514 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 ADNPQ9H2P0 1102 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 LIN28AQ9H9Z2 209 aaKnown RBP17.14■□□□□ 0.33
PTN-201ENST00000348225 HS3ST3B1Q9Y662 390 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 A0A1W2PNU3 283 aaPredicted RBP17.14■□□□□ 0.33
PTN-201ENST00000348225 ZAR1LA6NP61 321 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 ALG1L2C9J202 215 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 H3BN98 237 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 PPM1BO75688 479 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 LYPD3O95274 346 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 CLPTM1O96005 669 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 NAGAP17050 411 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 TCN2P20062 427 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 POU1F1P28069 291 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 OMPP47874 163 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 CDC42P60953 191 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 TSPAN31Q12999 210 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 APOFQ13790 326 aa17.14■□□□□ 0.33
PTN-201ENST00000348225 MAD2L1BPQ15013 274 aaPredicted RBP17.14■□□□□ 0.33
PTN-201ENST00000348225 PTGES3Q15185 160 aaKnown RBP17.14■□□□□ 0.33
PTN-201ENST00000348225 CD226Q15762 336 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms