RNA–Protein interactions for RNA: ENST00000347545.8

ARHGEF1-202, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-202ENST00000347545 QPRTQ15274 297 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 MRPL2Q5T653 305 aaKnown RBP13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 METAP1DQ6UB28 335 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 PRR23CQ6ZRP0 262 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 ZNF438Q7Z4V0 828 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 DUSP18Q8NEJ0 188 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 ALG8Q9BVK2 526 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 CD93Q9NPY3 652 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 SIDT1Q9NXL6 827 aaKnown RBP13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 CLDND1Q9NY35 253 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 CLCA3PQ9Y6N3 262 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 ARHGEF17Q96PE2 2063 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 LOC105369274A0A096LPK9 316 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 LOC102723532A0A0G2JNH3 316 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 HMGN1P05114 100 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 PSKH1P11801 424 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 CPMP14384 443 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 COL9A1P20849 921 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 IFNA8P32881 189 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 THBS2P35442 1172 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 FAM27D1Q5T7N8 215 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 TRIQKQ629K1 86 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 IL20RBQ6UXL0 311 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 MEPCEQ7L2J0 689 aaKnown RBP13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 OR4N4Q8N0Y3 316 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 SMAP2Q8WU79 429 aaPredicted RBP13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 PTP4A1Q93096 173 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 DAPP1Q9UN19 280 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 COLEC10Q9Y6Z7 277 aa13.49□□□□□ -0.25
ARHGEF1-202ENST00000347545 TRAPPC13A5PLN9 417 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 LYRM1O43325 122 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 RGS9O75916 674 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 THBS1P07996 1170 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 RGS1Q08116 209 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 OR1Q1Q15612 314 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 FCRLBQ6BAA4 426 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 OR13C2Q8NGS9 318 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 NACC2Q96BF6 587 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 NLKQ9UBE8 527 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 ZMIZ1Q9ULJ6 1067 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 HEBP2Q9Y5Z4 205 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 A0A0G2JMP0 313 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 A0A0X1KG70 313 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 LANCL1O43813 399 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 RFPL3O75679 317 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 ATP6V1E1P36543 226 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 EFR3AQ14156 821 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 YIF1BQ5BJH7 314 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 USP53Q70EK8 1073 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 CADM2Q8N3J6 435 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 TOR1AIP2Q8NFQ8 470 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 OR4M2Q8NGB6 313 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 SERINC2Q96SA4 455 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 IRF2BPLQ9H1B7 796 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 PIGUQ9H490 435 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 BABAM2Q9NXR7 383 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 PTGFRNQ9P2B2 879 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 C19orf53Q9UNZ5 99 aaPredicted RBP13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 SLC22A7Q9Y694 548 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 LDB3O75112 727 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 CLUP10909 449 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 IFI30P13284 250 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 GALP22466 123 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 PTBP1P26599 531 aaKnown RBP eCLIP13.48□□□□□ -0.252e-7■■■■□ 26.4
ARHGEF1-202ENST00000347545 NOS3P29474 1203 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 E2F1Q01094 437 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 BDH1Q02338 343 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 TMEM196Q5HYL7 178 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 DCST2Q5T1A1 773 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 ZAR1Q86SH2 424 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 GID4Q8IVV7 300 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 ZNF619Q8N2I2 560 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 LNX2Q8N448 690 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 ACBD7Q8N6N7 88 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 BMPERQ8N8U9 685 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 DTX3Q8N9I9 347 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 TMEM239Q8WW34 195 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 RIPOR3Q96MK2 946 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 HS6ST2Q96MM7 605 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 PILRAQ9UKJ1 303 aa13.48□□□□□ -0.25
ARHGEF1-202ENST00000347545 TBC1D3DA0A087WVF3 549 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 TBC1D3IA0A087WXS9 549 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 TBC1D3EA0A087X179 549 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 CDHR4A6H8M9 788 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 TBC1D3LB9A6J9 549 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 SGK494L7N484 410 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 FGF17O60258 216 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 REM1O75628 298 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 AGR2O95994 175 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 TBC1D3HP0C7X1 549 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 UGT2B7P16662 529 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 NDUFS1P28331 727 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 CLDN20P56880 219 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 PRPF38BQ5VTL8 546 aaKnown RBP13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 TBC1D3CQ6IPX1 549 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 TBC1D3Q8IZP1 549 aaPredicted RBP13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 YIPF7Q8N8F6 280 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 C19orf18Q8NEA5 215 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 FGF14Q92915 247 aa13.47□□□□□ -0.25
ARHGEF1-202ENST00000347545 NECTIN4Q96NY8 510 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms