RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 C9JVG2 144 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 NPIPA7E9PJI5 369 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 EEF1E1O43324 174 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 CYP7B1O75881 506 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 RCBTB2O95199 551 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 CSTAP01040 98 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 CRHP06850 196 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 GUSBP08236 651 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 NPIPA8P0DM63 369 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 IL12AP29459 219 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 UQCRC1P31930 480 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 AQP5P55064 265 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 CASP9P55211 416 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 MYBPHQ13203 477 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 CBFBQ13951 182 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 PDZK1Q5T2W1 519 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 PPP4R4Q6NUP7 873 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 EIF3MQ7L2H7 374 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 RNF130Q86XS8 419 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 LIX1LQ8IVB5 337 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 OR5M1Q8NGP8 315 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 RFWD2Q8NHY2 731 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 CKAP2Q8WWK9 683 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 RAB8BQ92930 207 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 ROPN1LQ96C74 230 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 INTS12Q96CB8 462 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 PINK1Q9BXM7 581 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 ZNF350Q9GZX5 532 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 RAD21L1Q9H4I0 556 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 RABEP2Q9H5N1 569 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 TIGARQ9NQ88 270 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 THUMPD1Q9NXG2 353 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 MKLN1Q9UL63 735 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 CARD8Q9Y2G2 431 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 GPC6Q9Y625 555 aaPredicted RBP14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 CACNA1DQ01668 2161 aa14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 UTP20O75691 2785 aaKnown RBP14.24□□□□□ -0.13
TSPAN4-201ENST00000346501 SERINC4A6NH21 518 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 CYSRT1A8MQ03 144 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 EIF1AYO14602 144 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 ZNF195O14628 629 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 SYNGR4O95473 234 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 GSNP06396 782 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 NR2F1P10589 423 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 ELK4P28324 431 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 ADH6P28332 368 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 CPA2P48052 419 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 IDH3AP50213 366 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 ZNF136P52737 540 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 CLDN15P56746 228 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 RAC1P63000 192 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 ZNF117Q03924 483 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 FGFBP1Q14512 234 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 CD226Q15762 336 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 ZNF141Q15928 474 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 PLPPR5Q32ZL2 321 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 TIGD2Q4W5G0 525 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 HEPHL1Q6MZM0 1159 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 MAVSQ7Z434 540 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 ADGRE4PQ86SQ3 457 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 ZNF619Q8N2I2 560 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 C9orf106Q8NAJ2 232 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 OR5W2Q8NH69 310 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 TMEM234Q8WY98 164 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 RNASE6Q93091 150 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 C14orf79Q96F83 325 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 REXO5Q96IC2 774 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 RNF145Q96MT1 663 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 ZNF559Q9BR84 538 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 SIKE1Q9BRV8 207 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 PIGMQ9H3S5 423 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 CALML5Q9NZT1 146 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 CLCF1Q9UBD9 225 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 KCNN3Q9UGI6 736 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 MCTS1Q9ULC4 181 aaKnown RBP14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 TRIM33Q9UPN9 1127 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 SLC35A3Q9Y2D2 325 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 ZNF175Q9Y473 711 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 PKDREJQ9NTG1 2253 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 UNC79Q9P2D8 2635 aa14.23□□□□□ -0.13
TSPAN4-201ENST00000346501 NOTCH2Q04721 2471 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 SYT5O00445 386 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 PLGP00747 810 aaPredicted RBP14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 ZCCHC18P0CG32 403 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 PGCP20142 388 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 CRATP43155 626 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 EIF1AXP47813 144 aaKnown RBP14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 TFF3Q07654 80 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 GTF2IRD2BQ6EKJ0 949 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 DNAJC14Q6Y2X3 702 aaPredicted RBP14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 ESPNLQ6ZVH7 1005 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 GTF2IRD2Q86UP8 949 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 DMRTC2Q8IXT2 367 aaPredicted RBP14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 GCNT2Q8N0V5 402 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 NAXEQ8NCW5 288 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 PMM1Q92871 262 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 TRNT1Q96Q11 434 aaKnown RBP14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 INPP5KQ9BT40 448 aa14.22□□□□□ -0.13
TSPAN4-201ENST00000346501 LAT2Q9GZY6 243 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms