RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 TOR2AQ5JU69 321 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 KRBOX4Q5JUW0 171 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TSSK4Q6SA08 328 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 RAB11FIP2Q7L804 512 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 LRRTM3Q86VH5 581 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 CELF5Q8N6W0 485 aaKnown RBP4.5□□□□□ -1.69
CSMD3-203ENST00000343508 KCT2Q8NC54 265 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 CYB5D2Q8WUJ1 264 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 SLC6A7Q99884 636 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 GAL3ST1Q99999 423 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 CLEC2DQ9UHP7 191 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 GPR34Q9UPC5 381 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 NCR1O76036 304 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 C8AP07357 584 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 GZMKP49863 264 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TAS2R19P59542 299 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 NKX6-1P78426 367 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-203ENST00000343508 FCN2Q15485 313 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 ODF4Q2M2E3 257 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF529Q6P280 563 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 GPR155Q7Z3F1 870 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 C3orf58Q8NDZ4 430 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 PHOSPHO1Q8TCT1 267 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 CASTOR1Q8WTX7 329 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 METTL21AQ8WXB1 218 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 SYT4Q9H2B2 425 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 PELI2Q9HAT8 420 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 ADAM29Q9UKF5 820 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 MEGF11A6BM72 1044 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 NUDT19A8MXV4 375 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 HSPA12AO43301 675 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 SRMP19623 302 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 HLA-FP30511 346 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TRIM23P36406 574 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 ETV5P41161 510 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 XCR1P46094 333 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 KCNJ5P48544 419 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 BDH1Q02338 343 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 CCINQ13939 588 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 RPL22L1Q6P5R6 122 aaKnown RBP4.5□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF366Q8N895 744 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 OR51A7Q8NH64 312 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 F2RL3Q96RI0 385 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 MARVELD1Q9BSK0 173 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TTTY10Q9BZA0 68 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 MVB12BQ9H7P6 319 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 AK6Q9Y3D8 172 aaKnown RBP4.5□□□□□ -1.69
CSMD3-203ENST00000343508 PARP14Q460N5 1801 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 COL4A1P02462 1669 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 PDCD11Q14690 1871 aaKnown RBP4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TLX3O43711 291 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-203ENST00000343508 SCO2O43819 266 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 SSX5O60225 188 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 SYPP08247 313 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 MAT2AP31153 395 aaKnown RBP4.5□□□□□ -1.69
CSMD3-203ENST00000343508 CCKBRP32239 447 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 GDNFP39905 211 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 HTR4Q13639 388 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 EXOSC2Q13868 293 aaKnown RBP4.5□□□□□ -1.69
CSMD3-203ENST00000343508 ITPRIPL2Q3MIP1 535 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 ZMAT1Q5H9K5 638 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 IER5LQ5T953 404 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 CRTC1Q6UUV9 634 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 IL17RCQ8NAC3 791 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 ACBD4Q8NC06 268 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 OR14C36Q8NHC7 312 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 ARPC5LQ9BPX5 153 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 SLC25A21Q9BQT8 299 aaPredicted RBP4.5□□□□□ -1.69
CSMD3-203ENST00000343508 DPH7Q9BTV6 452 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 GALNT9Q9HCQ5 603 aa4.5□□□□□ -1.69
CSMD3-203ENST00000343508 TRABD2BA6NFA1 517 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SLC9B1P1A6NJY1 282 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 GPR89AB7ZAQ6 455 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SGK494L7N484 410 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SRPX2O60687 465 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SOD2P04179 222 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 GPR89BP0CG08 455 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PBX2P40425 430 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 NKX3-2P78367 333 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SP3Q02447 781 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF616Q08AN1 781 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CCL14Q16627 93 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 RNASE10Q5GAN6 216 aaKnown RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 PSRC1Q6PGN9 363 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 LRFN4Q6PJG9 635 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 CFAP77Q6ZQR2 320 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 OR4M1Q8NGD0 313 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 FOXRED1Q96CU9 486 aaPredicted RBP4.49□□□□□ -1.69
CSMD3-203ENST00000343508 LRRC46Q96FV0 321 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ARHGAP9Q9BRR9 750 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SLCO5A1Q9H2Y9 848 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 APMAPQ9HDC9 416 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF281Q9Y2X9 895 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 C17orf113A0A1B0GUU1 675 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 FXYD1O00168 92 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SGCEO43556 437 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 GMFGO60234 142 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 ASGR2P07307 311 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 SFTPBP07988 381 aa4.49□□□□□ -1.69
CSMD3-203ENST00000343508 HCKP08631 526 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms