RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 CASP8AP2Q9UKL3 1982 aa13.73□□□□□ -0.21
RET-201ENST00000340058 PEX12O00623 359 aa13.73□□□□□ -0.21
RET-201ENST00000340058 PDCD5O14737 125 aa13.73□□□□□ -0.21
RET-201ENST00000340058 AQP9O43315 295 aa13.73□□□□□ -0.21
RET-201ENST00000340058 PGAM2P15259 253 aa13.73□□□□□ -0.21
RET-201ENST00000340058 TNFRSF17Q02223 184 aa13.73□□□□□ -0.21
RET-201ENST00000340058 SCRN3Q0VDG4 424 aa13.73□□□□□ -0.21
RET-201ENST00000340058 ATXN7L3Q14CW9 347 aaPredicted RBP13.73□□□□□ -0.21
RET-201ENST00000340058 DUSP5Q16690 384 aa13.73□□□□□ -0.21
RET-201ENST00000340058 INAVAQ3KP66 663 aa13.73□□□□□ -0.21
RET-201ENST00000340058 SLC25A24Q6NUK1 477 aa13.73□□□□□ -0.21
RET-201ENST00000340058 PTOV1Q86YD1 416 aa13.73□□□□□ -0.21
RET-201ENST00000340058 OR51Q1Q8NH59 317 aa13.73□□□□□ -0.21
RET-201ENST00000340058 SETD6Q8TBK2 473 aa13.73□□□□□ -0.21
RET-201ENST00000340058 TNFRSF13CQ96RJ3 184 aa13.73□□□□□ -0.21
RET-201ENST00000340058 ZNF559Q9BR84 538 aa13.73□□□□□ -0.21
RET-201ENST00000340058 MROQ9BYG7 248 aa13.73□□□□□ -0.21
RET-201ENST00000340058 KIR3DX1Q9H7L2 352 aa13.73□□□□□ -0.21
RET-201ENST00000340058 IFT46Q9NQC8 304 aa13.73□□□□□ -0.21
RET-201ENST00000340058 HYAL3O43820 417 aaPredicted RBP13.73□□□□□ -0.21
RET-201ENST00000340058 PPM1BO75688 479 aa13.73□□□□□ -0.21
RET-201ENST00000340058 NCR1O76036 304 aa13.73□□□□□ -0.21
RET-201ENST00000340058 F10P00742 488 aa13.73□□□□□ -0.21
RET-201ENST00000340058 PKLRP30613 574 aa13.73□□□□□ -0.21
RET-201ENST00000340058 MAN2A2P49641 1150 aa13.73□□□□□ -0.21
RET-201ENST00000340058 GDI2P50395 445 aaKnown RBP13.73□□□□□ -0.21
RET-201ENST00000340058 EMP2P54851 167 aa13.73□□□□□ -0.21
RET-201ENST00000340058 CXCR4P61073 352 aa13.73□□□□□ -0.21
RET-201ENST00000340058 ADARB1P78563 741 aaKnown RBP13.73□□□□□ -0.21
RET-201ENST00000340058 TBRG1Q3YBR2 411 aa13.73□□□□□ -0.21
RET-201ENST00000340058 C6orf183Q5T699 404 aa13.73□□□□□ -0.21
RET-201ENST00000340058 SLC48A1Q6P1K1 146 aa13.73□□□□□ -0.21
RET-201ENST00000340058 PLPP6Q8IY26 295 aa13.73□□□□□ -0.21
RET-201ENST00000340058 ANKRD53Q8N9V6 530 aa13.73□□□□□ -0.21
RET-201ENST00000340058 TMEM41AQ96HV5 264 aa13.73□□□□□ -0.21
RET-201ENST00000340058 RXFP3Q9NSD7 469 aa13.73□□□□□ -0.21
RET-201ENST00000340058 TAS2R10Q9NYW0 307 aa13.73□□□□□ -0.21
RET-201ENST00000340058 STOML2Q9UJZ1 356 aa13.73□□□□□ -0.21
RET-201ENST00000340058 TBC1D24Q9ULP9 559 aa13.73□□□□□ -0.21
RET-201ENST00000340058 CKAP5Q14008 2032 aa13.72□□□□□ -0.21
RET-201ENST00000340058 INMT-MINDY4F8WBC2 141 aa13.72□□□□□ -0.21
RET-201ENST00000340058 ECDO95905 644 aaPredicted RBP13.72□□□□□ -0.21
RET-201ENST00000340058 HCKP08631 526 aa13.72□□□□□ -0.21
RET-201ENST00000340058 PGCP20142 388 aa13.72□□□□□ -0.21
RET-201ENST00000340058 PPP5CP53041 499 aa13.72□□□□□ -0.21
RET-201ENST00000340058 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.72□□□□□ -0.21
RET-201ENST00000340058 OTPQ5XKR4 325 aa13.72□□□□□ -0.21
RET-201ENST00000340058 MSRB3Q8IXL7 192 aa13.72□□□□□ -0.21
RET-201ENST00000340058 CNOT9Q92600 299 aaKnown RBP13.72□□□□□ -0.21
RET-201ENST00000340058 LMF1Q96S06 567 aa13.72□□□□□ -0.21
RET-201ENST00000340058 CTRCQ99895 268 aa13.72□□□□□ -0.21
RET-201ENST00000340058 SGPP1Q9BX95 441 aa13.72□□□□□ -0.21
RET-201ENST00000340058 POT1Q9NUX5 634 aa13.72□□□□□ -0.21
RET-201ENST00000340058 TMPRSS11EQ9UL52 423 aa13.72□□□□□ -0.21
RET-201ENST00000340058 SOCS6O14544 535 aa13.72□□□□□ -0.21
RET-201ENST00000340058 CASC3O15234 703 aaKnown RBP13.72□□□□□ -0.21
RET-201ENST00000340058 AK1P00568 194 aa13.72□□□□□ -0.21
RET-201ENST00000340058 ISL1P61371 349 aa13.72□□□□□ -0.21
RET-201ENST00000340058 SFRP4Q6FHJ7 346 aaPredicted RBP13.72□□□□□ -0.21
RET-201ENST00000340058 ITGAMP11215 1152 aa13.72□□□□□ -0.21
RET-201ENST00000340058 MMP11P24347 488 aa13.72□□□□□ -0.21
RET-201ENST00000340058 ELAVL4P26378 380 aaKnown RBP13.72□□□□□ -0.21
RET-201ENST00000340058 LIPAP38571 399 aa13.72□□□□□ -0.21
RET-201ENST00000340058 KCNJ5P48544 419 aa13.72□□□□□ -0.21
RET-201ENST00000340058 ZNF45Q02386 682 aa13.72□□□□□ -0.21
RET-201ENST00000340058 MAPK14Q16539 360 aa13.72□□□□□ -0.21
RET-201ENST00000340058 ALG10Q5BKT4 473 aa13.72□□□□□ -0.21
RET-201ENST00000340058 ARHGAP11AQ6P4F7 1023 aa13.72□□□□□ -0.21
RET-201ENST00000340058 ZNF782Q6ZMW2 699 aaPredicted RBP13.72□□□□□ -0.21
RET-201ENST00000340058 ZNF283Q8N7M2 679 aa13.72□□□□□ -0.21
RET-201ENST00000340058 RCBTB1Q8NDN9 531 aa13.72□□□□□ -0.21
RET-201ENST00000340058 OR6C4Q8NGE1 309 aa13.72□□□□□ -0.21
RET-201ENST00000340058 TMEM234Q8WY98 164 aa13.72□□□□□ -0.21
RET-201ENST00000340058 CNN2Q99439 309 aaKnown RBP13.72□□□□□ -0.21
RET-201ENST00000340058 ELF4Q99607 663 aaPredicted RBP13.72□□□□□ -0.21
RET-201ENST00000340058 NUDT22Q9BRQ3 303 aa13.72□□□□□ -0.21
RET-201ENST00000340058 SDK2Q58EX2 2172 aa13.72□□□□□ -0.21
RET-201ENST00000340058 TCRBV5S2A0A599 114 aa13.71□□□□□ -0.21
RET-201ENST00000340058 PIP5K1CO60331 668 aa13.71□□□□□ -0.21
RET-201ENST00000340058 OR1D5P58170 312 aa13.71□□□□□ -0.21
RET-201ENST00000340058 DPTQ07507 201 aa13.71□□□□□ -0.21
RET-201ENST00000340058 PAQR6Q6TCH4 344 aa13.71□□□□□ -0.21
RET-201ENST00000340058 ZNF547Q8IVP9 402 aa13.71□□□□□ -0.21
RET-201ENST00000340058 EID2Q8N6I1 236 aa13.71□□□□□ -0.21
RET-201ENST00000340058 C19orf47Q8N9M1 422 aaKnown RBP13.71□□□□□ -0.21
RET-201ENST00000340058 UCN3Q969E3 161 aa13.71□□□□□ -0.21
RET-201ENST00000340058 MMP28Q9H239 520 aa13.71□□□□□ -0.21
RET-201ENST00000340058 RNF121Q9H920 327 aa13.71□□□□□ -0.21
RET-201ENST00000340058 FGF21Q9NSA1 209 aa13.71□□□□□ -0.21
RET-201ENST00000340058 C19orf25Q9UFG5 118 aaPredicted RBP13.71□□□□□ -0.21
RET-201ENST00000340058 DKKL1Q9UK85 242 aa13.71□□□□□ -0.21
RET-201ENST00000340058 PCDHGB6Q9Y5F9 930 aa13.71□□□□□ -0.21
RET-201ENST00000340058 ARHGAP33O14559 1287 aa13.71□□□□□ -0.21
RET-201ENST00000340058 BCAT2O15382 392 aaPredicted RBP13.71□□□□□ -0.21
RET-201ENST00000340058 OR3A3P47888 321 aa13.71□□□□□ -0.21
RET-201ENST00000340058 OR3A2P47893 321 aa13.71□□□□□ -0.21
RET-201ENST00000340058 SLC25A25Q6KCM7 469 aa13.71□□□□□ -0.21
RET-201ENST00000340058 DNM1P34Q6PK57 102 aa13.71□□□□□ -0.21
RET-201ENST00000340058 PJA1Q8NG27 643 aa13.71□□□□□ -0.21
RET-201ENST00000340058 NR4A3Q92570 626 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms