RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ARHGAP1Q07960 439 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 FAM182AQ5T1J6 154 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 MAMDC2Q7Z304 686 aaPredicted RBP12.15□□□□□ -0.46
USP47-202ENST00000339865 PXT1Q8NFP0 134 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 OR8J3Q8NGG0 315 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 DOK4Q8TEW6 326 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 TSGA13Q96PP4 275 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 CDH20Q9HBT6 801 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 SLC35D1Q9NTN3 355 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 ASH2LQ9UBL3 628 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 B4GALT7Q9UBV7 327 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 C17orf112F2Z3M2 114 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 MMP20O60882 483 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 AOC2O75106 756 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 OR2J3O76001 311 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 PPP1R3DO95685 299 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 PRDX3P30048 256 aaKnown RBP12.15□□□□□ -0.46
USP47-202ENST00000339865 HOXA11P31270 313 aaPredicted RBP12.15□□□□□ -0.46
USP47-202ENST00000339865 SORDQ00796 357 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 VSIG10LQ86VR7 867 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 C11orf49Q9H6J7 331 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 COQ4Q9Y3A0 265 aa12.15□□□□□ -0.46
USP47-202ENST00000339865 SPATA31A3Q5VYP0 1347 aa12.15□□□□□ -0.47
USP47-202ENST00000339865 C2CD4BA6NLJ0 364 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 TP53I11O14683 189 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 TGFB1I1O43294 461 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 CHRM4P08173 479 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 HLA-EP13747 358 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 PREPP48147 710 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 ENPP6Q6UWR7 440 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 RFPL4BQ6ZWI9 263 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 NPAS4Q8IUM7 802 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 TMEM181Q9P2C4 612 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 GTF3C1Q12789 2109 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 NAP1L6A6NFF2 107 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 PPP5D1E7EU14 171 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 GABARAPH6UMI1 98 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 GABARAPO95166 117 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 DEFA4P12838 97 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 NFYBP25208 207 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 LMO2P25791 158 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 RAB11AP62491 216 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 PTP4A2Q12974 167 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 SERPINA11Q86U17 422 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 TXNDC5Q8NBS9 432 aaKnown RBP12.14□□□□□ -0.47
USP47-202ENST00000339865 TM7SF3Q9NS93 570 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 SUSD5O60279 629 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 ASGR2P07307 311 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 INHBEP58166 350 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 OLIG2Q13516 323 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 P2RY14Q15391 338 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 KIAA0895LQ68EN5 471 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 GCNT2Q8N0V5 402 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 ZNF317Q96PQ6 595 aaPredicted RBP12.14□□□□□ -0.47
USP47-202ENST00000339865 CCM2LQ9NUG4 571 aaPredicted RBP12.14□□□□□ -0.47
USP47-202ENST00000339865 TEX264Q9Y6I9 313 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 A0A1B0GVG6 124 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 CBX7O95931 251 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 TK1P04183 234 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 HEXAP06865 529 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 POLR2CP19387 275 aaPredicted RBP12.14□□□□□ -0.47
USP47-202ENST00000339865 RAB3AP20336 220 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 GABRA2P47869 451 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 FLT3LGP49771 235 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 HLCSP50747 726 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 TPMTP51580 245 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 WNT4P56705 351 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 RPS15P62841 145 aaKnown RBP12.14□□□□□ -0.47
USP47-202ENST00000339865 TAGLNQ01995 201 aaKnown RBP12.14□□□□□ -0.47
USP47-202ENST00000339865 PRRT3Q5FWE3 981 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 VWA1Q6PCB0 445 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 MYO3AQ8NEV4 1616 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 HPRP00739 348 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 LILRA4P59901 499 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 MYBPHQ13203 477 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 MSMO1Q15800 293 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 TMEM31Q5JXX7 168 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 CILP2Q8IUL8 1156 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 LACC1Q8IV20 430 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 FANCMQ8IYD8 2048 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 TRAV20A0A0B4J274 112 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 MEGF11A6BM72 1044 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 B4DXG7 233 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 P2RX6O15547 441 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 OR13C7P0DN81 318 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 APLNRP35414 380 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 PSMB3P49720 205 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 GSK3AP49840 483 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 EFNA3P52797 238 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 LBX1P52954 281 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 RPL7L1Q6DKI1 246 aaKnown RBP12.14□□□□□ -0.47
USP47-202ENST00000339865 RNF111Q6ZNA4 994 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 TVP23CQ96ET8 276 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 DPH2Q9BQC3 489 aaPredicted RBP12.14□□□□□ -0.47
USP47-202ENST00000339865 DPH3P1Q9H4G8 78 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 YJEFN3A6XGL0 299 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 DENRO43583 198 aaKnown RBP12.14□□□□□ -0.47
USP47-202ENST00000339865 MITFO75030 526 aaPredicted RBP12.14□□□□□ -0.47
USP47-202ENST00000339865 TNFSF4P23510 183 aa12.14□□□□□ -0.47
USP47-202ENST00000339865 SFTPDP35247 375 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms