RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ZC3H12DA2A288 527 aaKnown RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 TRAPPC13A5PLN9 417 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF701M0R085 212 aaPredicted RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 WWP2O00308 870 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 KLF4O43474 513 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 RPLP0P05388 317 aaKnown RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 DRD5P21918 477 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 PCYT1AP49585 367 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 RPS3AP61247 264 aaKnown RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 GPLD1P80108 840 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF91Q05481 1191 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 COX10Q12887 443 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 MED22Q15528 200 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNHIT3Q15649 155 aaPredicted RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 CD226Q15762 336 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 DECR1Q16698 335 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 TIGD6Q17RP2 521 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 ANKDD1AQ495B1 522 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 GXYLT1Q4G148 440 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 WDR74Q6RFH5 385 aaPredicted RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 MBOAT2Q6ZWT7 520 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 CADM2Q8N3J6 435 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 TMEM105Q8N8V8 129 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 OR51A7Q8NH64 312 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 RAB2BQ8WUD1 216 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 ZFAND2BQ8WV99 257 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 EDAQ92838 391 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 OR6C1Q96RD1 312 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 GAL3ST4Q96RP7 486 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 CD180Q99467 661 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 CTRCQ99895 268 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 NDC1Q9BTX1 674 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 OR51E2Q9H255 320 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 MED20Q9H944 212 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF304Q9HCX3 659 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 MN1Q10571 1320 aaPredicted RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 IGKV3D-11A0A0A0MRZ8 115 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 IGHV5-10-1A0A0J9YXX1 117 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 PNMA8CA0A1B0GUJ8 204 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 A0A1B0GWA3 101 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 NPIPB9F8W1W9 429 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 PRAMEF2O60811 474 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 COQ9O75208 318 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 OR5F1O95221 314 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 DDAH2O95865 285 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 DBTP11182 482 aaKnown RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 IFI30P13284 250 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 GADD45AP24522 165 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 CD79BP40259 229 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 SNRPGP62308 76 aaKnown RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 RHAGQ02094 409 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 ARHGAP40Q5TG30 622 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 UBE2UQ5VVX9 321 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 PWWP2BQ6NUJ5 590 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 LRRC17Q8N6Y2 441 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 OR8J1Q8NGP2 316 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 OR13C2Q8NGS9 318 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 OR4C6Q8NH72 309 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 PIGXQ8TBF5 258 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC2A12Q8TD20 617 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 GNPDA2Q8TDQ7 276 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 THAP3Q8WTV1 239 aaPredicted RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 SMAP2Q8WU79 429 aaPredicted RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 TMEM239Q8WW34 195 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 GAB3Q8WWW8 586 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 MYDGFQ969H8 173 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 OTULINQ96BN8 352 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF582Q96NG8 517 aaPredicted RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 ADOQ96SZ5 270 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 NUDT9Q9BW91 350 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 CHRNA10Q9GZZ6 450 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 GPN2Q9H9Y4 310 aaPredicted RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 ZBTB20Q9HC78 741 aaPredicted RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 IL20Q9NYY1 176 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 SERTAD3Q9UJW9 196 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF223Q9UK11 482 aaPredicted RBP6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 GMEB2Q9UKD1 530 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 CLCA3PQ9Y6N3 262 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 PMF1-BGLAPU3KQ54 211 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 AHCTF1Q8WYP5 2266 aa6.82□□□□□ -1.32
SRFBP1-201ENST00000339397 SOX3P41225 446 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 SKP1P63208 163 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 IRF3Q14653 427 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 NR1D2Q14995 579 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 ARMCX4Q5H9R4 360 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 PLAG1Q6DJT9 500 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 SLC27A4Q6P1M0 643 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 TMEM71Q6P5X7 295 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 KIRREL2Q6UWL6 708 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 COX15Q7KZN9 410 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 BTLAQ7Z6A9 289 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 RANBP3LQ86VV4 465 aaPredicted RBP6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 P2RY8Q86VZ1 359 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 WDR36Q8NI36 951 aaKnown RBP6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 TBC1D15Q8TC07 691 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 ZNF721Q8TF20 911 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 GTPBP2Q9BX10 602 aaKnown RBP6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 HCAR1Q9BXC0 346 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 HHATLQ9HCP6 504 aa6.81□□□□□ -1.32
SRFBP1-201ENST00000339397 Q9N2J8 555 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms