RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ADAMDEC1O15204 470 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 RP2O75695 350 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 HPP00738 406 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 F12P00748 615 aaPredicted RBP11.78□□□□□ -0.52
DFFB-202ENST00000339350 MST1P26927 711 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 CNR2P34972 360 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 PPM1AP35813 382 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 RPS13P62277 151 aaKnown RBP11.78□□□□□ -0.52
DFFB-202ENST00000339350 RIPPLY1Q0D2K3 151 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 LMAN2Q12907 356 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 PDZK1IP1Q13113 114 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 SAPCD1Q5SSQ6 148 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 ZNF613Q6PF04 617 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 TMIGD1Q6UXZ0 262 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 PTCHD4Q6ZW05 846 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 HMGN2P46Q86SG4 172 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 C2orf73Q8N5S3 287 aaPredicted RBP11.78□□□□□ -0.52
DFFB-202ENST00000339350 AQP11Q8NBQ7 271 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 HSD17B8Q92506 261 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 C12orf66Q96MD2 445 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 MENTQ9BUN1 341 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 KATNB1Q9BVA0 655 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 CDCA4Q9BXL8 241 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 SLC6A20Q9NP91 592 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 FAM120CQ9NX05 1096 aaKnown RBP11.78□□□□□ -0.52
DFFB-202ENST00000339350 SH3BGRL2Q9UJC5 107 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 CA5BQ9Y2D0 317 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 CHST2Q9Y4C5 530 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 A0A1W2PPE3 182 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 C1orf226A1L170 272 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 CXorf65A6NEN9 183 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 KPNA3O00505 521 aaPredicted RBP11.78□□□□□ -0.52
DFFB-202ENST00000339350 PRRG1O14668 218 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 CASC3O15234 703 aaKnown RBP11.78□□□□□ -0.52
DFFB-202ENST00000339350 LCMT2O60294 686 aaKnown RBP11.78□□□□□ -0.52
DFFB-202ENST00000339350 TMEM127O75204 238 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 STX11O75558 287 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 HCKP08631 526 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 SERPINA4P29622 427 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 RPS26P11Q5JNZ5 115 aaPredicted RBP11.78□□□□□ -0.52
DFFB-202ENST00000339350 LRRN1Q6UXK5 716 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 GDPGP1Q6ZNW5 385 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 DCUN1D3Q8IWE4 304 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 ARMC5Q96C12 935 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 FCRL1Q96LA6 429 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 OR4K3Q96R72 315 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 SLC35A5Q9BS91 424 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 WASF3Q9UPY6 502 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 URADA6NGE7 173 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 MARCH11A6NNE9 402 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 CSO75390 466 aaKnown RBP11.78□□□□□ -0.52
DFFB-202ENST00000339350 TGFB1P01137 390 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 GASTP01350 101 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 IDSP22304 550 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 HOXC12P31275 282 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 EVX1P49640 407 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 ILF3Q12906 894 aaKnown RBP eCLIP11.78□□□□□ -0.52
DFFB-202ENST00000339350 SCARB2Q14108 478 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 CDPF1Q6NVV7 123 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 UNQ6494/PRO21346Q6UXR6 183 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 ZNF730Q6ZMV8 503 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 TMPRSS11BQ86T26 416 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 TMIEQ8NEW7 156 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 OR8J2Q8NGG1 315 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 HUS1BQ8NHY5 278 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 HHIPQ96QV1 700 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 YIPF4Q9BSR8 244 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 NLNQ9BYT8 704 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 POLR2J2Q9GZM3 115 aaKnown RBP11.78□□□□□ -0.52
DFFB-202ENST00000339350 CHST8Q9H2A9 424 aa11.78□□□□□ -0.52
DFFB-202ENST00000339350 AKAP7Q9P0M2 348 aaPredicted RBP11.78□□□□□ -0.52
DFFB-202ENST00000339350 MRPS23Q9Y3D9 190 aaKnown RBP11.78□□□□□ -0.52
DFFB-202ENST00000339350 C9orf170A2RU37 121 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 KIAA0355O15063 1070 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 CRTAPO75718 401 aaPredicted RBP11.77□□□□□ -0.52
DFFB-202ENST00000339350 UBXN7O94888 489 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 SERPINA3P01011 423 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 HPXP02790 462 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 TCRBP04435 133 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 CSNK1DP48730 415 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 RAB8AP61006 207 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 VEZF1Q14119 521 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 IFI44LQ53G44 452 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 CCDC157Q569K6 752 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 C3orf38Q5JPI3 329 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 KRBOX4Q5JUW0 171 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 ZNF227Q86WZ6 799 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 SPAG16Q8N0X2 631 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 DCAF4L2Q8NA75 395 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 HJURPQ8NCD3 748 aaPredicted RBP11.77□□□□□ -0.52
DFFB-202ENST00000339350 OR10J5Q8NHC4 309 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 MISP3Q96FF7 219 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 GGACTQ9BVM4 153 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 ENKD1Q9H0I2 346 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 REEP4Q9H6H4 257 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 B4GALT6Q9UBX8 382 aa11.77□□□□□ -0.52
DFFB-202ENST00000339350 A0A1B0GVC2 190 aa11.77□□□□□ -0.53
DFFB-202ENST00000339350 PLSCR5A0PG75 271 aa11.77□□□□□ -0.53
DFFB-202ENST00000339350 A6NIN4 97 aa11.77□□□□□ -0.53
DFFB-202ENST00000339350 C1orf196B1AJZ1 125 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms