RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ZNF563Q8TA94 476 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 KLK6Q92876 244 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 PGAP2Q9UHJ9 254 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 CHST2Q9Y4C5 530 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 COL4A1P02462 1669 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 POP7O75817 140 aaKnown RBP12.44□□□□□ -0.42
COL2A1-201ENST00000337299 EIF4EP06730 217 aaKnown RBP12.44□□□□□ -0.42
COL2A1-201ENST00000337299 ADH1AP07327 375 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 IDSP22304 550 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 MAOBP27338 520 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 PGFP49763 221 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 MINDY4Q4G0A6 757 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 MARCH8Q5T0T0 291 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 C9orf62Q8N4C0 152 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 OR4E2Q8NGC2 313 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 ST7LQ8TDW4 575 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 CXorf40AQ8TE69 158 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 ZAR1LA6NP61 321 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 GIMD1P0DJR0 217 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 RAD52P43351 418 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 POU4F2Q12837 409 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 C17orf99Q6UX52 265 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 SERINC5Q86VE9 423 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 LNX2Q8N448 690 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 ACOT11Q8WXI4 607 aaPredicted RBP12.44□□□□□ -0.42
COL2A1-201ENST00000337299 GHSRQ92847 366 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 MSLNLQ96KJ4 702 aa12.44□□□□□ -0.42
COL2A1-201ENST00000337299 SRA1Q9HD15 236 aaKnown RBP12.44□□□□□ -0.42
COL2A1-201ENST00000337299 UBL3O95164 117 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 TXNDC12O95881 172 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 ARAFP10398 606 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 RAB6AP20340 208 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 TUBG1P23258 451 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 HSD3B2P26439 372 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 TRIM23P36406 574 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 CBX5P45973 191 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 PPT1P50897 306 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 SEC61A1P61619 476 aaKnown RBP12.43□□□□□ -0.42
COL2A1-201ENST00000337299 NFATC4Q14934 902 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 TRAM1Q15629 374 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 TUSC1Q2TAM9 212 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 ADAM5Q6NVV9 412 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 BAIAP2L2Q6UXY1 529 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 SLC16A13Q7RTY0 426 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 BCL7CQ8WUZ0 217 aaPredicted RBP12.43□□□□□ -0.42
COL2A1-201ENST00000337299 POLDIP3Q9BY77 421 aaKnown RBP12.43□□□□□ -0.42
COL2A1-201ENST00000337299 ZC3H12DA2A288 527 aaKnown RBP12.43□□□□□ -0.42
COL2A1-201ENST00000337299 ZNF98A6NK75 572 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 MCIDASD6RGH6 385 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 NDUFS4O43181 175 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 PPP1R3DO95685 299 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 PRR35P0CG20 571 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 MMP11P24347 488 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 GRK6P43250 576 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 CCR8P51685 355 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 SSX2Q16385 188 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 ARSIQ5FYB1 569 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 ZNF585AQ6P3V2 769 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 ZNF101Q8IZC7 436 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 KLHDC9Q8NEP7 349 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 OR8J2Q8NGG1 315 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 OR6N2Q8NGY6 317 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 CXorf58Q96LI9 332 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 LIN7BQ9HAP6 207 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 USP36Q9P275 1121 aaKnown RBP12.43□□□□□ -0.42
COL2A1-201ENST00000337299 FBXO10Q9UK96 956 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 Q9Y3F1 56 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 ANKRD36CQ5JPF3 1778 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 COL2A1P02458 1487 aaPredicted RBP12.43□□□□□ -0.42
COL2A1-201ENST00000337299 GXYLT2A0PJZ3 443 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 SNAPC5O75971 98 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 CRYBB2P43320 205 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 SFRP5Q5T4F7 317 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 MLIPQ5VWP3 458 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 CCDC71Q8IV32 467 aaPredicted RBP12.43□□□□□ -0.42
COL2A1-201ENST00000337299 CMKLR1Q99788 373 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 GPR62Q9BZJ7 368 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 SLC6A17Q9H1V8 727 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 CENPMQ9NSP4 180 aa12.43□□□□□ -0.42
COL2A1-201ENST00000337299 TNFRSF10BO14763 440 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 SMAD6O43541 496 aaKnown RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 FBXO24O75426 580 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 RAB3DO95716 219 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 WDPCPO95876 746 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 MMP2P08253 660 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 GUCA1AP43080 201 aaPredicted RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 UBE2IP63279 158 aaKnown RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 NKAPLQ5M9Q1 402 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 PLEKHS1Q5SXH7 462 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 LAIR2Q6ISS4 152 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 KIAA1211LQ6NV74 962 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 KLHL24Q6TFL4 600 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 OR1J4Q8NGS1 313 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 TFGQ92734 400 aaPredicted RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 MKKSQ9NPJ1 570 aaPredicted RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 SIPA1L3O60292 1781 aaPredicted RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 DOCK2Q92608 1830 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 A0A0B4J2A0 478 aa12.42□□□□□ -0.42
COL2A1-201ENST00000337299 A0A1W2PQ45 241 aaPredicted RBP12.42□□□□□ -0.42
COL2A1-201ENST00000337299 A0A1W2PQY0 241 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms