RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 HCRTR1O43613 425 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 LCATP04180 440 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 MAGEA8P43361 318 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 HTR4Q13639 388 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 SWI5Q1ZZU3 235 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 DGLUCYQ7Z3D6 616 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 SLC38A5Q8WUX1 472 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 NINJ1Q92982 152 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 SLC22A4Q9H015 551 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 CXorf36Q9H7Y0 433 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 STOML2Q9UJZ1 356 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF221Q9UK13 617 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 C12orf71A8MTZ7 269 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 RRP8O43159 456 aaKnown RBP14.03□□□□□ -0.16
C9orf47-201ENST00000334490 VNN2O95498 520 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 RLN2P04090 185 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 SSTR4P31391 388 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 TSFMP43897 325 aaKnown RBP14.03□□□□□ -0.16
C9orf47-201ENST00000334490 HLCSP50747 726 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 TGFBR3Q03167 851 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 GLO1Q04760 184 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF750Q32MQ0 723 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 C22orf42Q6IC83 251 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 OR13C3Q8NGS6 347 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 AMDHD1Q96NU7 426 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 CDC6Q99741 560 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 CHIAQ9BZP6 476 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 ATP13A2Q9NQ11 1180 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 FBXO9Q9UK97 447 aaPredicted RBP14.03□□□□□ -0.16
C9orf47-201ENST00000334490 FARSAQ9Y285 508 aaKnown RBP14.03□□□□□ -0.16
C9orf47-201ENST00000334490 CD8B2A6NJW9 211 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 PLPP1O14494 284 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 CEACAM5P06731 702 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 CD8BP10966 210 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 CSNK1A1P48729 337 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 TMEM176BQ3YBM2 270 aaPredicted RBP14.03□□□□□ -0.16
C9orf47-201ENST00000334490 MARVELD2Q8N4S9 558 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 MZB1Q8WU39 189 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 SENP5Q96HI0 755 aaPredicted RBP14.03□□□□□ -0.16
C9orf47-201ENST00000334490 SLC46A1Q96NT5 459 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 CPPED1Q9BRF8 314 aaPredicted RBP14.03□□□□□ -0.16
C9orf47-201ENST00000334490 BRWD3Q6RI45 1802 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 LRIT2A6NDA9 550 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 ALOX12BO75342 701 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 ST6GAL1P15907 406 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 FRKP42685 505 aaPredicted RBP14.03□□□□□ -0.16
C9orf47-201ENST00000334490 METAP1P53582 386 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 PRKCDQ05655 676 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 PODNL1Q6PEZ8 512 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 RAB11FIP2Q7L804 512 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 TMED4Q7Z7H5 227 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 MS4A15Q8N5U1 240 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 CHTF18Q8WVB6 975 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 NEDD4LQ96PU5 975 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 SLC30A2Q9BRI3 323 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 WACQ9BTA9 647 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 URM1Q9BTM9 101 aaKnown RBP14.03□□□□□ -0.16
C9orf47-201ENST00000334490 SPTA1P02549 2419 aa14.03□□□□□ -0.16
C9orf47-201ENST00000334490 APC2O95996 2303 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 F5H5K5 113 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 FBP2O00757 339 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 OLFM2O95897 454 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 GRK5P34947 590 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 BCL2L15Q5TBC7 163 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 OR1J4Q8NGS1 313 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 OR8S1Q8NH09 359 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 ELP5Q8TE02 316 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 TRUB1Q8WWH5 349 aaKnown RBP14.02□□□□□ -0.16
C9orf47-201ENST00000334490 SLC29A1Q99808 456 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 ENAMQ9NRM1 1142 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 CAMK2AQ9UQM7 478 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 CABIN1Q9Y6J0 2220 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 TRAV27A0A087WT01 109 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 TEX13DA0A0J9YY54 714 aaPredicted RBP14.02□□□□□ -0.16
C9orf47-201ENST00000334490 ZNF432O94892 652 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 HERV-K104P61576 105 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 RAB39AQ14964 217 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 SPRED3Q2MJR0 410 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 SYCE2Q6PIF2 218 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 KLHL15Q96M94 604 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 IRF2BPLQ9H1B7 796 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 OR52D1Q9H346 318 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 FOLH1BQ9HBA9 442 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 WASH6PQ9NQA3 447 aa14.02□□□□□ -0.16
C9orf47-201ENST00000334490 CNOT11Q9UKZ1 510 aaKnown RBP14.02□□□□□ -0.16
C9orf47-201ENST00000334490 CENPBD1B2RD01 187 aa14.02□□□□□ -0.17
C9orf47-201ENST00000334490 TFF2Q03403 129 aa14.02□□□□□ -0.17
C9orf47-201ENST00000334490 RBPJQ06330 500 aa14.02□□□□□ -0.17
C9orf47-201ENST00000334490 CDH24Q86UP0 819 aa14.02□□□□□ -0.17
C9orf47-201ENST00000334490 WSB2Q9NYS7 404 aaPredicted RBP14.02□□□□□ -0.17
C9orf47-201ENST00000334490 PLEK2Q9NYT0 353 aa14.02□□□□□ -0.17
C9orf47-201ENST00000334490 MEMO1Q9Y316 297 aa14.02□□□□□ -0.17
C9orf47-201ENST00000334490 ZNF182P17025 639 aaPredicted RBP14.02□□□□□ -0.17
C9orf47-201ENST00000334490 RPS5P46782 204 aaKnown RBP14.02□□□□□ -0.17
C9orf47-201ENST00000334490 CCL11P51671 97 aa14.02□□□□□ -0.17
C9orf47-201ENST00000334490 PRAMEF17Q5VTA0 474 aa14.02□□□□□ -0.17
C9orf47-201ENST00000334490 MED25Q71SY5 747 aa14.02□□□□□ -0.17
C9orf47-201ENST00000334490 CDX2Q99626 313 aaPredicted RBP14.02□□□□□ -0.17
C9orf47-201ENST00000334490 TMEM9BQ9NQ34 198 aa14.02□□□□□ -0.17
C9orf47-201ENST00000334490 TESQ9UGI8 421 aaKnown RBP14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms