RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 RAB11FIP2Q7L804 512 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 POMGNT2Q8NAT1 580 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 DAZLQ92904 295 aaKnown RBP11.03□□□□□ -0.64
HDAC6-201ENST00000334136 MGAT4AQ9UM21 535 aa11.03□□□□□ -0.64
HDAC6-201ENST00000334136 CLDN24A6NM45 220 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 LYRM1O43325 122 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 HMGN1P05114 100 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 S100A6P06703 90 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 ITGAMP11215 1152 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 RHCEP18577 417 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 PRKACBP22694 351 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 PSMA3P25788 255 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 EPHA2P29317 976 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 ACVR1BP36896 505 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 BCL6P41182 706 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 EMP2P54851 167 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 KCNAB1Q14722 419 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 MICAQ29983 383 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 C4orf46Q504U0 113 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 SLC30A6Q6NXT4 461 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 TM9SF2Q99805 663 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 CACNG6Q9BXT2 260 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 ENPP4Q9Y6X5 453 aa11.02□□□□□ -0.64
HDAC6-201ENST00000334136 ANKRD34BA5PLL1 514 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 HIST1H2ABP04908 130 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 GSTM3P21266 225 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 ITPKBP27987 946 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 LCN1P31025 176 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 OTX2P32243 289 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 ODF4Q2M2E3 257 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 MTFR2Q6P444 385 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 DHRS13Q6UX07 377 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 DLEU7Q6UYE1 221 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 SHISA6Q6ZSJ9 500 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 HIST3H2AQ7L7L0 130 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 BAHD1Q8TBE0 780 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-201ENST00000334136 GRHL3Q8TE85 626 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 HIST1H2ACQ93077 130 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 NKD1Q969G9 470 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 METTL2AQ96IZ6 378 aaKnown RBP11.02□□□□□ -0.65
HDAC6-201ENST00000334136 NUDT22Q9BRQ3 303 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 PELOQ9BRX2 385 aaKnown RBP11.02□□□□□ -0.65
HDAC6-201ENST00000334136 IKZF5Q9H5V7 419 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 CLMPQ9H6B4 373 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 TRIM36Q9NQ86 728 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 POMT2Q9UKY4 750 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 MAB21L2Q9Y586 359 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 MUC6Q6W4X9 2439 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 IGHV1OR21-1A0A087WYE8 117 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 EML2O95834 649 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 PEPDP12955 493 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 FASLGP48023 281 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 KHKP50053 298 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 NRG3P56975 720 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 DSG2Q14126 1118 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 UGT3A2Q3SY77 523 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 FRMPD2BQ6IN97 320 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 OAFQ86UD1 273 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 YIPF7Q8N8F6 280 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 OR4K5Q8NGD3 323 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 DOK4Q8TEW6 326 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 COQ8BQ96D53 544 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 LPAR4Q99677 370 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 MS4A8Q9BY19 250 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 NUDT15Q9NV35 164 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 MED11Q9P086 117 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 GBF1Q92538 1859 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 SPTA1P02549 2419 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 A0A1W2PR77 199 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 ANKRD28O15084 1053 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 HK1P19367 917 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 IL12BP29460 328 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 MAGEA2P43356 314 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 MASP1P48740 699 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 RBBP4Q09028 425 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 ATXN7L3Q14CW9 347 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-201ENST00000334136 DNAJC22Q8N4W6 341 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 TMEM156Q8N614 296 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 ADAMTS16Q8TE57 1224 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 OR5P2Q8WZ92 322 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 CIDECQ96AQ7 238 aaPredicted RBP11.02□□□□□ -0.65
HDAC6-201ENST00000334136 TCF7L1Q9HCS4 588 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 SLC35C2Q9NQQ7 365 aa11.02□□□□□ -0.65
HDAC6-201ENST00000334136 PTRH2Q9Y3E5 179 aaKnown RBP11.02□□□□□ -0.65
HDAC6-201ENST00000334136 MEN1O00255 615 aa11.01□□□□□ -0.65
HDAC6-201ENST00000334136 SCAMP2O15127 329 aaKnown RBP11.01□□□□□ -0.65
HDAC6-201ENST00000334136 KLK8O60259 260 aa11.01□□□□□ -0.65
HDAC6-201ENST00000334136 RFPL3O75679 317 aa11.01□□□□□ -0.65
HDAC6-201ENST00000334136 PTGER1P34995 402 aa11.01□□□□□ -0.65
HDAC6-201ENST00000334136 MTNR1AP48039 350 aa11.01□□□□□ -0.65
HDAC6-201ENST00000334136 SLC35A2P78381 396 aa11.01□□□□□ -0.65
HDAC6-201ENST00000334136 SNTB2Q13425 540 aaKnown RBP11.01□□□□□ -0.65
HDAC6-201ENST00000334136 TRIP6Q15654 476 aaKnown RBP11.01□□□□□ -0.65
HDAC6-201ENST00000334136 SYT6Q5T7P8 510 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-201ENST00000334136 LRRC25Q8N386 305 aaPredicted RBP11.01□□□□□ -0.65
HDAC6-201ENST00000334136 FYTTD1Q96QD9 318 aaKnown RBP11.01□□□□□ -0.65
HDAC6-201ENST00000334136 CALML5Q9NZT1 146 aa11.01□□□□□ -0.65
HDAC6-201ENST00000334136 CHD5Q8TDI0 1954 aa11.01□□□□□ -0.65
HDAC6-201ENST00000334136 NYNRINQ9P2P1 1898 aaKnown RBP11.01□□□□□ -0.65
HDAC6-201ENST00000334136 SCN2BO60939 215 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms