RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 TRMT11Q7Z4G4 463 aaKnown RBP16.95■□□□□ 0.3
PKP3-201ENST00000331563 TMEM25Q86YD3 366 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 MEIOBQ8N635 442 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 ZNF485Q8NCK3 441 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 TREX2Q9BQ50 279 aaPredicted RBP16.95■□□□□ 0.3
PKP3-201ENST00000331563 WDR26Q9H7D7 661 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 CXorf36Q9H7Y0 433 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 TEX10Q9NXF1 929 aaPredicted RBP16.95■□□□□ 0.3
PKP3-201ENST00000331563 SLC22A7Q9Y694 548 aa16.95■□□□□ 0.3
PKP3-201ENST00000331563 MYO10Q9HD67 2058 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 KIAA0355O15063 1070 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 ARPC5O15511 151 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 FGBP02675 491 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 EN2P19622 333 aaPredicted RBP16.94■□□□□ 0.3
PKP3-201ENST00000331563 ATP5A1P25705 553 aaKnown RBP16.94■□□□□ 0.3
PKP3-201ENST00000331563 AGTRAPQ6RW13 159 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 ARL9Q6T311 187 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 ESPNLQ6ZVH7 1005 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 PDZD9Q8IXQ8 264 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 C16orf78Q8WTQ4 265 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 CNOT9Q92600 299 aaKnown RBP16.94■□□□□ 0.3
PKP3-201ENST00000331563 ZNF607Q96SK3 696 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 FUZQ9BT04 418 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 ISG20L2Q9H9L3 353 aaKnown RBP16.94■□□□□ 0.3
PKP3-201ENST00000331563 H2AFY2Q9P0M6 372 aaPredicted RBP16.94■□□□□ 0.3
PKP3-201ENST00000331563 ZNF69Q9UC07 566 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 LTBP2Q14767 1821 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 KIAA1671Q9BY89 1806 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 PMS2P1A4D2B8 440 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 LRRN3E7EW58 273 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 RASGRP1O95267 797 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 ZNF806P0C7X5 589 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 CTNNB1P35222 781 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 PPM1AP35813 382 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 HTR4Q13639 388 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 SLC22A10Q63ZE4 541 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 VASNQ6EMK4 673 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 ASPGQ86U10 573 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 SCARB1Q8WTV0 552 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 ING5Q8WYH8 240 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 KCTD12Q96CX2 325 aaKnown RBP16.94■□□□□ 0.3
PKP3-201ENST00000331563 NARS2Q96I59 477 aaKnown RBP16.94■□□□□ 0.3
PKP3-201ENST00000331563 RSPO3Q9BXY4 272 aaPredicted RBP16.94■□□□□ 0.3
PKP3-201ENST00000331563 LRRN3Q9H3W5 708 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 IL23AQ9NPF7 189 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 ING1Q9UK53 422 aaPredicted RBP16.94■□□□□ 0.3
PKP3-201ENST00000331563 A4GNTQ9UNA3 340 aa16.94■□□□□ 0.3
PKP3-201ENST00000331563 OBSL1O75147 1896 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 GFYI3L273 518 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 RLN2P04090 185 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 ZNF3P17036 446 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 UQCRC2P22695 453 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 EPHA4P54764 986 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 ERVK-25P63136 954 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 PTSQ03393 145 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 TEAD2Q15562 447 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 SGCAQ16586 387 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 HES5Q5TA89 166 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 HIST2H2AA3Q6FI13 130 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 KIAA1211LQ6NV74 962 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 CDC73Q6P1J9 531 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 MED27Q6P2C8 311 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 ZNF322Q6U7Q0 402 aaPredicted RBP16.93■□□□□ 0.3
PKP3-201ENST00000331563 RFLNAQ6ZTI6 216 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 IZUMO1Q8IYV9 350 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 SLC6A16Q9GZN6 736 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 ARL6Q9H0F7 186 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 EQTNQ9NQ60 294 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 LSM7Q9UK45 103 aaKnown RBP16.93■□□□□ 0.3
PKP3-201ENST00000331563 RPH3AQ9Y2J0 694 aaPredicted RBP16.93■□□□□ 0.3
PKP3-201ENST00000331563 NPTNQ9Y639 398 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 D6RAR5 112 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 SMIM6P0DI80 62 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 PREPP48147 710 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 RAG2P55895 527 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 PSMA6P60900 246 aaKnown RBP16.93■□□□□ 0.3
PKP3-201ENST00000331563 EFNB1P98172 346 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 PITPNAQ00169 270 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 PRSS53Q2L4Q9 553 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 PAN3Q58A45 887 aaKnown RBP16.93■□□□□ 0.3
PKP3-201ENST00000331563 ASTLQ6HA08 431 aaPredicted RBP16.93■□□□□ 0.3
PKP3-201ENST00000331563 SLC30A6Q6NXT4 461 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 SMARCD3Q6STE5 483 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 SLC16A13Q7RTY0 426 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 PRICKLE2Q7Z3G6 844 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 OR51G2Q8NGK0 314 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 HMGB4Q8WW32 186 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 SPATA5L1Q9BVQ7 753 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 CNIH4Q9P003 139 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 CHST2Q9Y4C5 530 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 USP34Q70CQ2 3546 aa16.93■□□□□ 0.3
PKP3-201ENST00000331563 PLSCR5A0PG75 271 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 GRXCR1A8MXD5 290 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 ADH1AP07327 375 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 IL3P08700 152 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 RPL3P39023 403 aaKnown RBP16.92■□□□□ 0.3
PKP3-201ENST00000331563 MAPK9P45984 424 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 KCNJ5P48544 419 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 SLC25A35Q3KQZ1 300 aa16.92■□□□□ 0.3
PKP3-201ENST00000331563 FAIM2Q9BWQ8 316 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms