RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 BSGP35613 385 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 MAPK12P53778 367 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 CDH15P55291 814 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 CHRNB3Q05901 458 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 CSTF3Q12996 717 aaKnown RBP13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 PPA1Q15181 289 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 ZSWIM7Q19AV6 140 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 KRT71Q3SY84 523 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 DMRTA1Q5VZB9 504 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 MFSD12Q6NUT3 480 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 ZNF544Q6NX49 715 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 SLC22A25Q6T423 547 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 B3GLCTQ6Y288 498 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 RPS27LQ71UM5 84 aaKnown RBP13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 SVOPLQ8N434 492 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 OR5M1Q8NGP8 315 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 APOPT1Q96IL0 206 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 TRMOQ9BU70 441 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 TMEM109Q9BVC6 243 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 FAIM2Q9BWQ8 316 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 SORBS1Q9BX66 1292 aaKnown RBP13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 MID1IP1Q9NPA3 183 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 MKS1Q9NXB0 559 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 PSME2Q9UL46 239 aa13.03□□□□□ -0.32
CTHRC1-201ENST00000330295 OR2M5A3KFT3 312 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 GLOD5A6NK44 160 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 G3V2L1 256 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 PPP6CO00743 305 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 ACOX3O15254 700 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 EEDO75530 441 aaKnown RBP13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 PDYNP01213 254 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 KLK1P06870 262 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 MYZAPP0CAP1 466 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 HKR1P10072 659 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 EIF1AXP47813 144 aaKnown RBP13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 HNRNPH2P55795 449 aaKnown RBP13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 STK11Q15831 433 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 IMPG1Q17R60 797 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 C6orf163Q5TEZ5 329 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 LIPMQ5VYY2 423 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 OR52E8Q6IFG1 317 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 MRM1Q6IN84 353 aaKnown RBP13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 TFAP2EQ6VUC0 442 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 BHLHA15Q7RTS1 189 aaPredicted RBP13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 TRABD2AQ86V40 505 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 METTL4Q8N3J2 472 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 OR7G1Q8NGA0 311 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 SORCS2Q96PQ0 1159 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 MRPL1Q9BYD6 325 aaKnown RBP13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 MYOZ1Q9NP98 299 aaPredicted RBP13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 OXSMQ9NWU1 459 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 RAB21Q9UL25 225 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 EMCNQ9ULC0 261 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 USP22Q9UPT9 525 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 MGAT4BQ9UQ53 548 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 PLLPQ9Y342 182 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 ASB4Q9Y574 426 aa13.02□□□□□ -0.33
CTHRC1-201ENST00000330295 A0A1W2PS29 197 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 OR6C70A6NIJ9 312 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 C17orf51A8MQB3 221 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 RGS16O15492 202 aaPredicted RBP13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 TMPRSS11DO60235 418 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 TRIM13O60858 407 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 NTN1O95631 604 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 CHEK2O96017 543 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 ADAP00813 363 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 PIK3R1P27986 724 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 CHN2P52757 468 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 TRA2BP62995 288 aaKnown RBP13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 SPOCK1Q08629 439 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 ACSM2AQ08AH3 577 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 ITGADQ13349 1161 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 SPIN4Q56A73 249 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 ACSM2BQ68CK6 577 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 SHQ1Q6PI26 577 aaKnown RBP13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 FRMD7Q6ZUT3 714 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 COMMD6Q7Z4G1 85 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 GGNQ86UU5 652 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 FADS6Q8N9I5 356 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 MUCL1Q96DR8 90 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 COL21A1Q96P44 957 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 ITPAQ9BY32 194 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 DSN1Q9H410 356 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 FARSBQ9NSD9 589 aaKnown RBP13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 MCTS1Q9ULC4 181 aaKnown RBP13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 AP4B1Q9Y6B7 739 aa13.01□□□□□ -0.33
CTHRC1-201ENST00000330295 A0A1W2PR48 441 aa13□□□□□ -0.33
CTHRC1-201ENST00000330295 GOLGA6L10A6NI86 522 aa13□□□□□ -0.33
CTHRC1-201ENST00000330295 EIF1AYO14602 144 aaKnown RBP13□□□□□ -0.33
CTHRC1-201ENST00000330295 GBAP04062 536 aa13□□□□□ -0.33
CTHRC1-201ENST00000330295 TACSTD2P09758 323 aa13□□□□□ -0.33
CTHRC1-201ENST00000330295 EPHA1P21709 976 aa13□□□□□ -0.33
CTHRC1-201ENST00000330295 GAS1P54826 345 aa13□□□□□ -0.33
CTHRC1-201ENST00000330295 THSD4Q6ZMP0 1018 aa13□□□□□ -0.33
CTHRC1-201ENST00000330295 C10orf107Q8IVU9 208 aa13□□□□□ -0.33
CTHRC1-201ENST00000330295 ADCY4Q8NFM4 1077 aa13□□□□□ -0.33
CTHRC1-201ENST00000330295 OR4K14Q8NGD5 310 aa13□□□□□ -0.33
CTHRC1-201ENST00000330295 ZNF717Q9BY31 904 aaPredicted RBP13□□□□□ -0.33
CTHRC1-201ENST00000330295 CENPHQ9H3R5 247 aa13□□□□□ -0.33
CTHRC1-201ENST00000330295 GSTO2Q9H4Y5 243 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms