RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SMRP1Q8NCR6 262 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 OR52L1Q8NGH7 329 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 OR9A4Q8NGU2 314 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 PMM1Q92871 262 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 ARSGQ96EG1 525 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 NECTIN4Q96NY8 510 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 FN3KQ9H479 309 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 POLE3Q9NRF9 147 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 GPR27Q9NS67 375 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 TNFRSF10DQ9UBN6 386 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 POMT2Q9UKY4 750 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 CYP8B1Q9UNU6 501 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 TDRD6O60522 2096 aaKnown RBP13.49□□□□□ -0.25
TPM3-206ENST00000330188 A0A1W2PQL4 384 aaPredicted RBP13.49□□□□□ -0.25
TPM3-206ENST00000330188 CHST10O43529 356 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 AKAP8O43823 692 aaKnown RBP13.49□□□□□ -0.25
TPM3-206ENST00000330188 ATP6V1G1O75348 118 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 SLC35E2P0CK97 266 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 THEGLP0DJG4 465 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 AZGP1P25311 298 aaKnown RBP13.49□□□□□ -0.25
TPM3-206ENST00000330188 ATP6V1E1P36543 226 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 C1orf61Q13536 156 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 LRIT3Q3SXY7 679 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 VASNQ6EMK4 673 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 ZNF322Q6U7Q0 402 aaPredicted RBP13.49□□□□□ -0.25
TPM3-206ENST00000330188 VWA5B2Q8N398 1253 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 SLC44A3Q8N4M1 653 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 OR51G2Q8NGK0 314 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 OTULINQ96BN8 352 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 TOE1Q96GM8 510 aaKnown RBP13.49□□□□□ -0.25
TPM3-206ENST00000330188 SEMA6CQ9H3T2 930 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 MED20Q9H944 212 aa13.49□□□□□ -0.25
TPM3-206ENST00000330188 PAIP2BQ9ULR5 123 aaKnown RBP13.49□□□□□ -0.25
TPM3-206ENST00000330188 IGLV3-19P01714 112 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 IL7P13232 177 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 CTSEP14091 401 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 S1PR1P21453 382 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 DRD5P21918 477 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 AMZ1Q400G9 498 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 GARNL3Q5VVW2 1013 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 B3GLCTQ6Y288 498 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 THSD4Q6ZMP0 1018 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 TMPRSS11FQ6ZWK6 438 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 AKAP14Q86UN6 197 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 LNX2Q8N448 690 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 IL17RDQ8NFM7 739 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 OR13C2Q8NGS9 318 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 CHAC2Q8WUX2 184 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 CNOT9Q92600 299 aaKnown RBP13.48□□□□□ -0.25
TPM3-206ENST00000330188 BPIFA2Q96DR5 249 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 TMED9Q9BVK6 235 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 CAPN10Q9HC96 672 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 C14orf105Q9NVL8 296 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 ZC3H12DA2A288 527 aaKnown RBP13.48□□□□□ -0.25
TPM3-206ENST00000330188 C2CD4DB7Z1M9 353 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 OR10H2O60403 315 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 COQ9O75208 318 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 RCBTB2O95199 551 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 BMP7P18075 431 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 CELP19835 753 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 CASP3P42574 277 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 CAV3P56539 151 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 PSG6Q00889 435 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 SLC35F1Q5T1Q4 408 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 PDZK1Q5T2W1 519 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 DDI2Q5TDH0 399 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 ZNF613Q6PF04 617 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 ZC3H14Q6PJT7 736 aaKnown RBP13.48□□□□□ -0.25
TPM3-206ENST00000330188 SMARCD3Q6STE5 483 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 FAM131AQ6UXB0 335 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 MEPCEQ7L2J0 689 aaKnown RBP13.48□□□□□ -0.25
TPM3-206ENST00000330188 ZDHHC1Q8WTX9 485 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 FAM210AQ96ND0 272 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 COQ7Q99807 217 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 ZNF559Q9BR84 538 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 HCAR1Q9BXC0 346 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 RBCK1Q9BYM8 510 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 TBC1D17Q9HA65 648 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 MEPEQ9NQ76 525 aaPredicted RBP13.48□□□□□ -0.25
TPM3-206ENST00000330188 TIGARQ9NQ88 270 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 FLRT3Q9NZU0 649 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 FBXL21Q9UKT6 434 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 SIGLEC7Q9Y286 467 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 TMEM5Q9Y2B1 443 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 MED31Q9Y3C7 131 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 PCDHGB2Q9Y5G2 931 aa13.48□□□□□ -0.25
TPM3-206ENST00000330188 TMEM131Q92545 1883 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 TGFBR3LH3BV60 316 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 GABRPO00591 440 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 CASKO14936 926 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 RFPL3O75679 317 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 GAAP10253 952 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 RFX3P48380 749 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 CTBP2P56545 445 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 RPL13AP3Q6NVV1 102 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 ARMC6Q6NXE6 501 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 XKRXQ6PP77 449 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 NRARPQ7Z6K4 114 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 MARCH9Q86YJ5 346 aa13.47□□□□□ -0.25
TPM3-206ENST00000330188 KLBQ86Z14 1044 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms