RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 FZD5Q13467 585 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 TAF1CQ15572 869 aaPredicted RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 KCNA10Q16322 511 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 SLC5A12Q1EHB4 618 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 COL13A1Q5TAT6 717 aaPredicted RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 PODNL1Q6PEZ8 512 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 DNM1P46Q6ZS02 220 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 RHOUQ7L0Q8 258 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 ABHD13Q7L211 337 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 ZNF561Q8N587 486 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 KCNRGQ8N5I3 272 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 ACBD7Q8N6N7 88 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 GPR32P1Q8NGA4 272 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 SCAMP5Q8TAC9 235 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 ASB11Q8WXH4 323 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 NEURL3Q96EH8 262 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 PARK7Q99497 189 aaKnown RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 TEX101Q9BY14 249 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 TINAGL1Q9GZM7 467 aaPredicted RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 SMG9Q9H0W8 520 aaKnown RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 NFKBIL1Q9UBC1 381 aaPredicted RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 PLXNA4Q9HCM2 1894 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 A0A1W2PQH9 124 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 MEX3AA1L020 520 aaKnown RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 OR14I1A6ND48 311 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 RFXAPO00287 272 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 FOXE1O00358 373 aaPredicted RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 ARPC1BO15143 372 aaKnown RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 TREHO43280 583 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 GJB3O75712 270 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 IFNGP01579 166 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 MELTFP08582 738 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 FURINP09958 794 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 SLC25A4P12235 298 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 DRD5P21918 477 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 PTAFRP25105 342 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 SHC1P29353 583 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 ART1P52961 327 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 NKAPLQ5M9Q1 402 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 LPCAT3Q6P1A2 487 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 GAREM2Q75VX8 874 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 MISPQ8IVT2 679 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 FBXO16Q8IX29 292 aaPredicted RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 IQCF1Q8N6M8 205 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 BMPERQ8N8U9 685 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 ZFP41Q8N8Y5 198 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 OR4K5Q8NGD3 323 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 BRIX1Q8TDN6 353 aaKnown RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 FCAMRQ8WWV6 532 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 GTF3AQ92664 365 aaKnown RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 PRRC1Q96M27 445 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 RBM14Q96PK6 669 aaKnown RBP7.83□□□□□ -1.16
SKA2-201ENST00000330137 EDEM2Q9BV94 578 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 FNDC11Q9BVV2 318 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 TREM2Q9NZC2 230 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 MYO16Q9Y6X6 1858 aa7.83□□□□□ -1.16
SKA2-201ENST00000330137 MBLAC1A4D2B0 266 aaPredicted RBP7.82□□□□□ -1.16
SKA2-201ENST00000330137 C1orf196B1AJZ1 125 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 CHURC1-FNTBB4DL54 471 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 FAM227AF5H4B4 570 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 BLOC1S5-TXNDC5H3BN57 136 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 AGRPO00253 132 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 SURF4O15260 269 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 FGF16O43320 207 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 GATBO75879 557 aaKnown RBP7.82□□□□□ -1.16
SKA2-201ENST00000330137 SIX6O95475 246 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 C6orf47O95873 294 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 CD8AP01732 235 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 RAB40ALP0C0E4 278 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 ZDHHC11BP0C7U3 371 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 ABOP16442 354 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 MAT2AP31153 395 aaKnown RBP7.82□□□□□ -1.16
SKA2-201ENST00000330137 ATP5C1P36542 298 aaKnown RBP7.82□□□□□ -1.16
SKA2-201ENST00000330137 RAD52P43351 418 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 KCNJ3P48549 501 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 CSNK1EP49674 416 aaKnown RBP7.82□□□□□ -1.16
SKA2-201ENST00000330137 CD81P60033 236 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 ILF3Q12906 894 aaKnown RBP eCLIP7.82□□□□□ -1.162e-15■■■■□ 22.5
SKA2-201ENST00000330137 SERTAD2Q14140 314 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 SMCO1Q147U7 214 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 PLEKHS1Q5SXH7 462 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 ZNF425Q6IV72 752 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 ZNF813Q6ZN06 617 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 SLC36A1Q7Z2H8 476 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 KLBQ86Z14 1044 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 OR2AK2Q8NG84 335 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 ABHD4Q8TB40 342 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 LKAAEAR1Q8TD35 194 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 HASPINQ8TF76 798 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 RAB40AQ8WXH6 277 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 BRI3BPQ8WY22 251 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 THAP4Q8WY91 577 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 CLP1Q92989 425 aaKnown RBP7.82□□□□□ -1.16
SKA2-201ENST00000330137 PPCDCQ96CD2 204 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 CMSS1Q9BQ75 279 aaKnown RBP7.82□□□□□ -1.16
SKA2-201ENST00000330137 OR10A4Q9H209 315 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 SAGE1Q9NXZ1 904 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 TAS2R8Q9NYW2 309 aa7.82□□□□□ -1.16
SKA2-201ENST00000330137 H2AFY2Q9P0M6 372 aaPredicted RBP7.82□□□□□ -1.16
SKA2-201ENST00000330137 KANTRA0A1W2PQU2 76 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms